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MiPNet12.10 TIP2k-manual |
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Oroboros (2021-07-08) Mitochondr Physiol Network
Abstract: Gradl L, Gradl P, Gnaiger E (2021) Titration-Injection microPump TIP2k manual. Mitochondr Physiol Network 12.10(09):1-20.
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| Was published in year | Reference | Organism | Tissue;cell | |
|---|---|---|---|---|
| MiPNet18.10 O2k-Specifications | 2024-03-26 |  | Human | Fibroblast |
| Donnelly 2023 MitoFit | 2023 | Donnelly C, Komlódi T, Cecatto C, Cardoso LHD, Compagnion AC, Matera A, Tavernari D, Zanou N, Kayser B, Gnaiger E, Place N (2023) Functional hypoxia reduces mitochondrial calcium uptake. MitoFit Preprints 2023.2. https://doi.org/10.26124/mitofit:2023-0002 — 2024-11-17 published in Redox Biol. | Human Mouse | Skeletal muscle Heart Nervous system Other cell lines |
| Baglivo 2022 BEC | 2022 | Baglivo E, Cardoso LHD, Cecatto C, Gnaiger E (2022) Statistical analysis of instrumental reproducibility as internal quality control in high-resolution respirometry. Bioenerg Commun 2022.8. https://doi.org/10.26124/bec:2022-0008 | HEK | |
| MiPNet12.10 TIP2k-manual | 2021-07-08 | | ||
| Malagrino 2019 Oxid Med Cell Longev | 2019 | Malagrinò F, Zuhra K, Mascolo L, Mastronicola D, Vicente JB, Forte E, Giuffrè A (2019) Hydrogen sulfide oxidation: adaptive changes in mitochondria of SW480 colorectal cancer cells upon exposure to hypoxia. Oxid Med Cell Longev 2019:8102936. | Human | Endothelial;epithelial;mesothelial cell |
| Doerrier 2018 Methods Mol Biol | 2018 | Doerrier C, Garcia-Souza LF, Krumschnabel G, Wohlfarter Y, Mészáros AT, Gnaiger E (2018) High-Resolution FluoRespirometry and OXPHOS protocols for human cells, permeabilized fibers from small biopsies of muscle, and isolated mitochondria. Methods Mol Biol 1782:31-70. https://doi.org/10.1007/978-1-4939-7831-1_3 | Human Mouse Rat Saccharomyces cerevisiae | Heart Skeletal muscle Endothelial;epithelial;mesothelial cell Blood cells HEK Platelet |
| Fisar 2017 Indian J Biochem Biophys | 2017 | Fišar Z, Hroudová J, Namrata S, Macečková D, Kopřivová A (2017) Protocols for high-resolution respirometry experiments to test the activity of electron transfer system of pig brain mitochondria. Indian J Biochem Biophys 54:258-72. | Pig | Nervous system |
| MiPNet10.04 CellRespiration | 2016-08-08 |  | Mouse | Blood cells |
| MiPNet21.07 MitoFit DatLab PT | 2016-07-20 | | Human | |
| Schiffer 2016 Am J Physiol Cell Physiol | 2016 | Schiffer TA, Peleli M, Sundqvist ML, Ekblom B, Lundberg JO, Weitzberg E, Larsen FJ (2016) Control of human energy expenditure by cytochrome c oxidase subunit IV-2. Am J Physiol Cell Physiol 311:C452-61. | Human | Skeletal muscle HEK |
| Ivarsson 2016 Physiol Behav | 2016 | Ivarsson N, Schiffer TA, Hernández A, Lanner JT, Weitzberg E, Lundberg JO, Westerblad H (2016) Dietary nitrate markedly improves voluntary running in mice. Physiol Behav 168:55-61. | Mouse | Skeletal muscle |
| MiPNet09.01 O2k-ParadigmShift | 2015 | Oxygraph-2k: Paradigm shift and features of high-resolution respirometry. Mitochondr Physiol Network 09.01. | ||
| Harrison 2015 J Appl Physiol | 2015 | Harrison DK, Fasching M, Fontana-Ayoub M, Gnaiger E (2015) Cytochrome redox states and respiratory control in mouse and beef heart mitochondria at steady-state levels of hypoxia. J Appl Physiol 119:1210-8. https://doi.org/10.1152/japplphysiol.00146.2015 | Mouse Bovines | Heart |
| Hezel 2015 Redox Biol | 2015 | Hezel MP, Liu M, Schiffer TA, Larsen FJ, Checa A, Wheelock CE, Carlström M, Lundberg JO, Weitzberg E (2015) Effects of long-term dietary nitrate supplementation in mice. Redox Biol 5:234-42. | Mouse | Skeletal muscle |
| Iftikar 2015 Comp Biochem Physiol A Mol Integr Physiol | 2015 | Iftikar FI, Morash AJ, Cook DG, Herbert NA, Hickey AJ (2015) Temperature acclimation of mitochondria function from the hearts of a temperate wrasse (Notolabrus celidotus). Comp Biochem Physiol A Mol Integr Physiol 184:46-55. | Fishes | Heart |
| Abou-Hamdan 2015 Methods Enzymol | 2015 | Abou-Hamdan A, Guedouari-Bounihi H, Lenoir V, Andriamihaja M, Blachier F, Bouillaud F (2015) Oxidation of H2S in mammalian cells and mitochondria. Methods Enzymol 554:201-28. | Human Pig Mouse Rat | Heart Nervous system Liver Kidney Genital CHO Neuroblastoma Fibroblast |
| Matallo 2014 Nitric Oxide | 2014 | Matallo J, Vogt J, McCook O, Wachter U, Tillmans F, Groeger M, Szabo C, Georgieff M, Radermacher P, Calzia E (2014) Sulfide-inhibition of mitochondrial respiration at very low oxygen concentrations. Nitric Oxide 15:79-84. | Mouse | Lung;gill Macrophage-derived |
| Schiffer 2014 FASEB J | 2014 | Schiffer TA, Ekblom B, Lundberg JO, Weitzberg E, Larsen FJ (2014) Dynamic regulation of metabolic efficiency explains tolerance to acute hypoxia in humans. FASEB J 28:4303-11. | Human | Skeletal muscle |
| Van Bergen 2014 Mitochondrion | 2014 | Van Bergen NJ, Blake RE, Crowston JG, Trounce IA (2014) Oxidative phosphorylation measurement in cell lines and tissues. Mitochondrion 15:24-33. | Human Mouse | Nervous system Blood cells |
| Reilly 2013 J Exp Biol | 2013 | Reilly BD, Hickey AJ, Cramp RL, Franklin CE (2013) Decreased hydrogen peroxide production and mitochondrial respiration in skeletal muscle but not cardiac muscle of the green-striped burrowing frog, a natural model of muscle disuse. J Exp Biol 217:1087-93. | Amphibians | Heart Skeletal muscle |
| Smith 2013 Thesis The University of Guelph - Canada | 2013 | Smith BK (2013) Investigations into the regulation of skeletal muscle mitochondrial metabolism. Thesis The University of Guelph - Canada 139pp. | Rat | Skeletal muscle |
| Gnaiger 2012 Mitochondr Physiol Network Bioblast 2012 | 2012 | | ||
| Moon 2012 J Biol Chem | 2012 | Moon SH, Jenkins CM, Kiebish MA, Sims HF, Mancuso DJ, Gross RW (2012) Genetic ablation of calcium-independent phospholipase A2γ (iPLA2γ) attenuates calcium-induced opening of the mitochondrial permeability transition pore and resultant cytochrome c release. J Biol Chem 287:29837-50. | Mouse | Liver |
| Lucchinetti 2012 Anesthesiology | 2012 | Lucchinetti E, Awad AE, Rahman M, Feng J, Lou PH, Zhang L, Ionescu L, Lemieux H, Thébaud B, Zaugg M (2012) Antiproliferative effects of local anesthetics on mesenchymal stem cells: potential implications for tumor spreading and wound healing. Anesthesiology 116:841-56. | Stem cells | |
| Pesta 2012 Methods Mol Biol | 2012 | Pesta D, Gnaiger E (2012) High-resolution respirometry. OXPHOS protocols for human cells and permeabilized fibers from small biopsies of human muscle. Methods Mol Biol 810:25-58. https://doi.org/10.1007/978-1-61779-382-0_3 | Human | Skeletal muscle Other cell lines HEK Fibroblast HUVEC |
| Lagoutte 2010 Biochim Biophys Acta | 2010 | Lagoutte E, Mimoun S, Andriamihaja M, Chaumontet C, Blachier F, Bouillaud F (2010) Oxidation of hydrogen sulfide remains a priority in mammalian cells and causes reverse electron transfer in colonocytes. Biochim Biophys Acta 1797:1500-11. | Mouse | Heart Nervous system Liver Kidney CHO |
| Sjoevall 2010 Crit Care | 2010 | Sjoevall F, Morota S, Hansson Magnus J, Friberg H, Gnaiger E, Elmer E (2010) Temporal increase of platelet mitochondrial respiration is negatively associated with clinical outcome in patients with sepsis. Crit Care 14:R214. | Human | Blood cells Platelet |
| Hansson 2010 J Biol Chem | 2010 | Hansson Magnus J, Morota S, Teilum M, Mattiasson G, Uchino H, Elmer E (2010) Increased potassium conductance of brain mitochondria induces resistance to permeability transition by enhancing matrix volume. J Biol Chem 285:741-50. | Rat | Nervous system |
| Gnaiger 2008 POS | 2008 | Gnaiger E (2008) Polarographic oxygen sensors, the oxygraph and high-resolution respirometry to assess mitochondrial function. In: Mitochondrial dysfunction in drug-induced toxicity (Dykens JA, Will Y, eds) John Wiley & Sons, Inc, Hoboken, NJ:327-52. | Mouse | Blood cells |
| Garedew 2005 Eur Shock Soc | 2005 | Garedew A, Hütter E, Haffner B, Gradl P, Gradl L, Jansen-Dürr P, Gnaiger E (2005) High-resolution respirometry for the study of mitochondrial function in health and disease. The Oroboros O2k. Proc 11th Congress Eur Shock Soc, Vienna, Austria (Redl H, ed) Medimond, Bologna:107-11. | Human | Fibroblast |
| Gnaiger 2001 Respir Physiol | 2001 | Gnaiger E (2001) Bioenergetics at low oxygen: dependence of respiration and phosphorylation on oxygen and adenosine diphosphate supply. https://doi.org/10.1016/S0034-5687(01)00307-3 | Human Rat | Heart Liver Endothelial;epithelial;mesothelial cell HUVEC |
| Gnaiger 2000 Proc Natl Acad Sci U S A | 2000 | Gnaiger E, Méndez G, Hand SC (2000) High phosphorylation efficiency and depression of uncoupled respiration in mitochondria under hypoxia. Proc Natl Acad Sci U S A 97:11080-5. https://doi.org/10.1073/pnas.97.20.11080 | Rat Artemia Crustaceans | Liver |
| MiPNet04.05 Titration-Injection | 1999-01 | | Human | Endothelial;epithelial;mesothelial cell HUVEC |
| Gnaiger 1998 BTK-HRR | 1998 | Gnaiger E, Kuznetsov AV, Lassnig B, Fuchs A, Reck M, Renner K, Stadlmann S, Rieger G, Margreiter R (1998) High-resolution respirometry. Optimum permeabilization of the cell membrane by digitonin. In BioThermoKinetics in the Post Genomic Era (Larsson C, Pahlman I-L, Gustafsson L, eds) Chalmers Reproservice, Göteborg:89-95. | Human | Endothelial;epithelial;mesothelial cell HUVEC |
Labels: MiParea: Instruments;methods
HRR: Oxygraph-2k, TIP2k, O2k-Manual
DatLab, DL7, O2k-Module
