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Difference between revisions of "DatLab"

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{{Product
{{Product
|description='''DatLab''' is the O2k-Software for Data Acquisition & Analysis, specifically developed for [[High-Resolution_FluoRespirometry| High-Resolution FluoRespirometry]] with the [[O2k-FluoRespirometer]].
|description='''DatLab''' is the O2k-Software for Data Acquisition & Analysis, specifically developed for [[high-resolution respirometry]] with the [[O2k-FluoRespirometer]].
The [[MiPNet21.16 DatLab 7| newest DatLab version]] is included in the [[O2k-FluoRespirometer]], and updates of DatLab are free of charge during the warranty period of the O2k.
The newest DatLab version is '''DatLab 7.4''', included in the [[O2k-FluoRespirometer]].
 
 
The minimum computer requirements are Intel-Core-2 or equivalent CPU, 2GB RAM and Windows XP. However, we recommend Intel i5 or equivalent CPU, 4GB RAM, Windows 10 and SSD. For the proper display of DatLab on your computer, please make sure the “Language settings” are set to English.
|product id=20700
|product id=20700
|product type=O2k, O2k-FluoRespirometer, Startup-O2k
|product type=O2k, O2k-FluoRespirometer, Power O2k-FluoRespirometer, Power O2k-Respirometer, Startup O2k-Respirometer
|info=[[MitoPedia: DatLab]], [[Oroboros O2k]]
|info=[[Image:MitoPedia.jpg|left|60px|link=http://www.bioblast.at/index.php/MitoPedia:_DatLab |MitoPedia: DatLab]] [[MitoPedia: DatLab]]
|product image=[[Image:Logo OROBOROS-DatLab.jpg|200px|right|DatLab]]
|product image=[[Image:Logo OROBOROS-DatLab.jpg|200px|right|DatLab]]
}}
}}
__TOC__
<br>
== DatLab 7: innovations ==
[[File:Expand.png|right|45px |Click to expand or collaps]]
A DL7 version is available for beta-testing (2017-July).
<div class="toccolours mw-collapsible mw-collapsed" style="background:#F7F8FF">
 
<span style="font-size:105%; color:#424242">[[File:Questions.jpg|left|18px |Asking]]'''Does [[DatLab]] software run on MAC devices?'''</span>
{{Publication
<div class="mw-collapsible-content"> No. The [[DatLab]] software is designed for Windows operating systems.
|title=[[Image:O2k-Info.png|right|60px|link=About Oroboros|About Oroboros]]DatLab 7: innovations.
</div>
|
</div>
|authors=Oroboros
<br>
|year=2017-07-11
|journal=Mitochondr Physiol Network
|abstract='''Gradl L, Capek O, Doerrier C, Sigl R, Mészáros A, Gnaiger E (2017) DatLab 7: innovations. Mitochondr Physiol Network 21.16'''
'''DatLab 7''' is the newly developed software for [[High-Resolution_FluoRespirometry| High-Resolution FluoRespirometry (HRFR)]] incorporating the legacy of previous DatLab versions  and new, user-friendly features on quality control, documentation, and traceability of measurements with the [[Oroboros O2k]].
|mipnetlab=AT_Innsbruck_Oroboros
}}
 
=== Oroboros O2k data aquisition ===
 
:::: DatLab 7 is optimized for the new Oroboros O2k-Series H applications, and supports all configurations of the previous O2k-Series (A-G). At the heart of DatLab 7, a conceptual unification is obtained in calibrations and flux analysis of the [[O2k-FluoRespirometer]] channels (oxygen and fluorescence: H2O2, mitochondrial membrane potential, calcium, ATP) and add-on O2k-Modules (ion selective electrodes: TTP+ and pH; amperometric modules: nitric oxide or hydrogen suflide).
 
=== Display and graphs ===
 
:::: Graphs are further improved for real-time display and publication. Versatile options allow an optimal setup of the graphical display of data. Standard graph layouts are provided. Lab and User-defined graph layouts can be stored and organized to support specific applications.
 
=== Management of user accounts and experiments ===
 
:::: As a new feature, user accounts are assigned to each measurement for better traceability and customization. This facilitates the organization of experimental data and allows user-specific configurations in DatLab 7. A detailed description section, cohort, sample and subsample data in the “Experimental setup” improves organization and analysis of results.
 
=== DL-Protocols ===
 
:::: Besides keeping the flexibility to run user-defined experiments, DatLab 7 is now equipped with the new [[DL-Protocols]] feature. A collection of evaluated and tested DL-Protocols are available providing instructions for performing standardized experiments according to a selected [[substrate-uncoupler-inhibitor titration]] (SUIT) protocol or instrumental quality control protocols (calibration and instrumental background tests). The user is guided stepwise through the protocol (displayed in the DL-Protocol window), facilitating calibration steps, minimizing handling errors and greatly improving performance during O2k measurements. Moreover, an automatic warning at low oxygen levels can be set to remind the user to re-oxygenate the chamber in time. The DL-Protocol window displays the sequence of pre-programmed [[Events - DatLab |events]] with chemicals, titration volumes and corresponding final concentrations. These are saved automatically when the event is set. For protocol-specific [[Marks - DatLab |marks]] the mark names are automatically assigned, with titration volumes which are used for calculation of sample dilution in analysis templates.
 
=== Events and marks ===
 
:::: Concentration and volume of the chemicals added during [[MitoPedia:_SUIT |'''Substrate-uncoupler-inhibition-titration (SUIT)''']] protocols can be stored together with event names and comments. Automatic outlier detection helps to avoid unwanted data points when setting marks during respiratory steady-states. On top the user has the option to delete, interpolate or restore data points of marks.
 
=== Mark statistics ===
 
:::: Numerous statistical functions are available for data analysis. “Marks statistics” organizes the marks and provides flexibility in displaying DL-Protocol marks, user-defined marks or both. The copy-to-clipboard function, with extended settings for backward compatibility, facilitates export to any third-party analysis software.
 
=== Experimental log ===
 
:::: An [[Experimental_log_-_DatLab |Experimental log]] enables to view and generate detailed report of experimental-, software- and hardware settings for optimal tracking of each experiment.
 
=== Contextual help ===
 
:::: A hyperlink-based contextual help system provides optimal support throughout settings and experimental steps in DatLab 7. [[MitoPedia:_DatLab |'''MitoPedia''']] provides the background for this function, which warranties up-to-date and verified information anytime.
 
=== TIP2k control ===
 
:::: The software-driven, feedback-controlled [[TIP2k-Module |Titration-Injection microPump (TIP2k)]] is an integral part of the O2k. In DatLab 7 TIP2k control has improved and facilitates user friendly and more flexible programming.
 
 
== DatLab O2k-Manuals ==
::::* These O2k-Manuals are for DatLab 6.
{{#ask:[[Category:Publications]] [[Instrument and method::O2k-Manual]] [[Additional label::DatLab]]
| mainlabel=Chapter
|?Has title=Section
|?Was published in year=Last update
|format=broadtable
|limit=500
|sort=
|order=ascending
|offset=0
}}
::::» [[DatLab 2]]
 
{{Technical support integrated}}}
 
[[Image:MitoPedia.jpg|left|60px|link=http://www.bioblast.at/index.php/MitoPedia: DatLab|MitoPedia: DatLab]]  
== MitoPedia: DatLab ==
 
::::» [[MitoPedia: DatLab]]
 
 
== PC requirements ==
::::* A PC or notebook is required (not included in our offers), connecting DatLab to the O2k via the USB cable supplied with the O2k.
::::* Minimum requirements: Intel-Core-2 or equivalent CPU, 2GB RAM, Windows XP
::::* Recommended: Intel i5 or equivalent CPU, 4GB RAM, Windows 7, SSD
::::* Working recommendation: For data safety reasons and optimal DatLab performance it is strongly recommend to operate your  DatLab files, DL-Protocols and DatLab templates on the PC‘s local HDD.
 
 
 
 
== Install DatLab 6  ==
::::» [[MiPNet19.21 DatLab 6| DatLab 6 innovations]] - OROBOROS INSTRUMENTS released DatLab 6 in October 2014.
 
:::: For DatLab 5 users, the [[MiPNet19.01 O2k-Core Manual Series F DatLab 5|O2k-Core Manual for DatLab 5]] is still available.
 
=== Download ===
::::* From the OROBOROS USB-flash drive delivered with the O2k.
::::» '''O2k-Manual:''' [[MiPNet19.18A O2k-Start]]
::::* O2k users can download the DatLab software from the OROBOROS website: » [http://www.oroboros.at/index.php?id=login_6 www.oroboros.at]
::::* The password is provided in the context of delivery of the O2k.  
::::* The [[Create account |Bioblast password]] is not the same as the Datlab password.
::::* If the password got lost, contact: [mailto:[email protected] [email protected]]
 
=== Install DatLab for two or more O2ks on one computer ===
:::# Install two (or more) copies of DatLab in two (or more) different directories, e.g. DatLab_O2k1 and DatLab_O2k2.  
:::# Create two or more shortcuts to the different .exe files. (the .exe files do not have to be renamed because they are in different directories). In this way the O2k-specific .ini files are separated in the different directories.
:::# Assign different [[Power-O2k]] numbers (see [[MiPNet19.18A_O2k-Start]]) and activate Graph/Display Power-O2k (see [[MiPNet19.18C_DatLab_Guide]]) to distinguish the individual O2ks in the graphs. 
 
 
== Upgrade DatLab and compatibility ==
:::# DatLab can be installed within the directory of a previous DatLab version (recommended option). In this case all DatLab files will be kept, but some layouts are overwritten.
:::# During the first start of DatLab the information in any previous *.ini file in the same directory will be copied to the new *.ini.
:::# The nomenclature of some default graph layouts has changed. We recommend users upgrading from DatLab 5 to update Graph layouts after installing the new DatLab version.
 
:::* '''Compatibility with DatLab 5''': DatLab 6 is downwards compatible with DatLab 5: DatLab 6 can read all files generated by DatLab 5. DatLab 5 is upwards compatible with 6 in regards to basic data storage. However, new features in DatLab 6 may cause problems e.g. in Marks Statistics. We therefore do not recommend to open files created with DatLab 6 in DatLab 5.
:::* '''Compatibility with DatLab 4''': DatLab 6 is downwards compatible with DatLab 4: DatLab 6 can read all files  generated by DatLab 4. However, DatLab 6 will save these files always in  the DatLab 5/6 format. Afterwards, these files will no longer be readable  by DatLab 4. Therefore, we recommend doing a complete transition from  DatLab 4 to DatLab 6, upgrading all computers. However, there is no need to mass convert the old DatLab 4 files. They can stay in the DatLab 4 format and will be converted by DatLab 6 when necessary.
:::* [[Talk:DatLab#DatLab_for_Apple]]
 
== Information for IT-administrators ==
 
:::: DatLab does not write to any part of the registry nor to any directory besides the program directory and its subdirectories, the data-directory and the users temporary files folder.
 
 
{{Labeling
{{Labeling
|area=Instruments;methods
|area=Instruments;methods
|instruments=Oxygraph-2k, O2k-Fluorometer, O2k-Manual
|instruments=Oxygraph-2k, O2k-Fluorometer
|additional=DatLab, DL7
|additional=DatLab, DL7
}}
}}

Revision as of 10:28, 3 December 2019

                



DatLab

O2k-Catalogue

Description DatLab is the O2k-Software for Data Acquisition & Analysis, specifically developed for high-resolution respirometry with the O2k-FluoRespirometer.

The newest DatLab version is DatLab 7.4, included in the O2k-FluoRespirometer.


The minimum computer requirements are Intel-Core-2 or equivalent CPU, 2GB RAM and Windows XP. However, we recommend Intel i5 or equivalent CPU, 4GB RAM, Windows 10 and SSD. For the proper display of DatLab on your computer, please make sure the “Language settings” are set to English.

Product ID 20700
Type O2k, O2k-FluoRespirometer, Power O2k-FluoRespirometer, Power O2k-Respirometer, Startup O2k-Respirometer
Link
MitoPedia: DatLab
MitoPedia: DatLab
Image
DatLab


Click to expand or collaps
Asking
Does DatLab software run on MAC devices?
No. The DatLab software is designed for Windows operating systems.


Labels: MiParea: Instruments;methods 





HRR: Oxygraph-2k, O2k-Fluorometer 

DatLab, DL7