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This page provides a simple browsing interface for finding entities described by a property and a named value. Other available search interfaces include the page property search, and the ask query builder.

List of results

SUIT-017 O2 pfi D049 + ('''A:''' '''[[SUIT-017]]''')
SUIT-003 O2 ce D009 + ('''A:''' - '''[[SUIT-003]]''' - [[Coupling-control protocol]] (CCP) in living cells (ce) with oligomycin (LEAK state))
SUIT-003 O2 ce D050 + ('''A:''' - [[Coupling-control protocol]] … '''A:''' - [[Coupling-control protocol]] for [[living cells]] with plasma membrane-permeable succinate ([[MitoKit-CII/Succinate-nv]]) - '''[[SUIT-003]]''' - Plasma membrane-permeable succinate (NV118) in ROUTINE respiration. [[Coupling-control protocol]] (CCP) in living cells (ce)[[Coupling-control protocol]] (CCP) in living cells (ce))
SUIT-003 O2 ce D062 + ('''A:''' Carrier control for the [[Coupling-control protocol]] for [[living cells]] with plasma membrane-permeable succinate ([[MitoKit-CII/Succinate-nv]]) - [[SUIT-003 O2 ce D050]])
SUIT-003 O2 ce D039 + ('''A:''' Coupling control in intact cells without oligomycin; ce: non-permeabilized cells -'''[[SUIT-003]]''')
SUIT-002 + ('''A:''' [[Doerrier 2018 Methods Mol Biol]])
SUIT-005 + ('''A:''' when [[Malate-anaplerotic pathway control state |malate-anaplerotic activity]] is zero)
SUIT-009 + ('''B''')
SUIT-003 Ce1;ce2U;ce3Rot;ce4S;ce5Ama + ('''B''' '''[[SUIT-003]]''' CCP(S))
SUIT-003 Ce1;ce1SD;ce3U;ce4Rot;ce5Ama + ('''B''' '''[[SUIT-003]]''' CCP(S))
SUIT-003 Ce1;ce3U;ce4Rot;ce5S;ce6Ama + ('''B''' '''[[SUIT-003]]''' CCP(S))
SUIT-003 O2 ce D028 + ('''B''' '''[[SUIT-003]]''' [[Coupling-control protocol]] with succinate for permeability test)
SUIT-003 Ce1;ce2SD;ce3Omy;ce4U- + ('''B''' '''[[SUIT-003]]''' [[Stadlmann 2006 Cell Biochem Biophys]])
SUIT-003 Ce1;ce1SD;ce2Omy;ce3U- + ('''B''' '''[[SUIT-003]]''' [[Stadlmann 2006 Cell Biochem Biophys]])
SUIT-009 O2 ce-pce D016 + ('''B''' - '''[[SUIT-009]]''' - short protocol for mt-respiration in ce: non-permeabilized cells, pce: permeabilized cells.)
SUIT-009 O2 mt D015 + ('''B''' - '''[[SUIT-009]]'''- short protocol for respiration in mitochondrial preparations; mt: isolated mitochondria, tissue homogenate and permeabilized cells)
SUIT-026 O2 mt D063 + ('''B''' - '''[[SUIT-026]]''' - Protocol for the respiratory control of [[SUIT-026 AmR mt D064]])
SUIT-026 O2 ce-pce D088 + ('''B''' - '''[[SUIT-026]]''' - Protocol for the respiratory control of [[SUIT-026 AmR ce-pce D087]])
SUIT-003 O2 ce D012 + ('''B''' - [[SUIT-003]])
SUIT-003 O2 ce D060 + ('''B''' - [[coupling-control protocol]] … '''B''' - [[coupling-control protocol]] for [[living cells]] with cell permeable compounds [[MitoKit-CII/Succinate-nv]] and [[MitoKit-CII/Malonate-nv]] -'''[[SUIT-003]]''' - Coupling-control protocol (CCP) with plasma membrane-permeable succinate ([[MitoKit-CII/Succinate-nv]]) and plasma membrane-permeable malonate ([[MitoKit-CII/Malonate-nv]]) in living cells (ce).[[MitoKit-CII/Malonate-nv]]) in living cells (ce).)
SUIT-003 O2 ce D061 + ('''B''' Carrier control for the [[coupling-control protocol]] for [[living cells]] with cell permeable compounds [[MitoKit-CII/Succinate-nv]] and [[MitoKit-CII/Malonate-nv]] - [[SUIT-003 O2 ce D060]])
1PM;2D;3G;4U;5S;6Rot- + ('''B''' [[Lemieux 2011 Int J Biochem Cell Biol]])
SUIT-003 Ce1;ce2SD;ce3U;ce4Rot;ce5Ama + ('''B''' [[Steinlechner-Maran 1997 Transplantation]])
SUIT-009 AmR mt D021 + ('''B''': short protocol for H2 … '''B''': short protocol for H2O2 (AmR) in mitochondrial preparations; mt: isolated mitochondria, tissue homogenate and permeabilized cells - '''[[SUIT-009]]'''short protocol for H2O2 (AmR) for isolated mitochondria, tissue homogenate and permeabilized cellst;2 (AmR) for isolated mitochondria, tissue homogenate and permeabilized cells)
SUIT-009 AmR ce-pce D019 + ('''B''': short protocol for H2O2 (AmR) in ce: non-permeabilized cells, pce: permeabilized cells -'''[[SUIT-009]]''')
SUIT-018 O2 mt D054 + ('''B''': '''[[SUIT-018]]''')
SUIT-003 AmR ce D017 + ('''B''': CCP(P) and cell membrane permeability test with succinate - [[SUIT-003]])
SUIT-003 Ce1;ce2U- + ('''B''': Coupling Control General protocol [[SUIT-003]] [[Steinlechner-Maran_1996_Am J Physiol Cell Physiol]])
SUIT-003 Ce1;ce3U- + ('''B''': Coupling Control General protocol [[SUIT-003]] [[Steinlechner-Maran_1996_Am J Physiol Cell Physiol]])
SUIT-008 O2 pce D25 + ('''B: SUIT 8 for permeabilized cells''' [[Lemieux 2017 Sci Rep]])
SUIT-003 AmR ce D058 + ('''B:''' Coupling control in intact cells with oligomycin to study the inhibitory effect of the AmR assay components on the respiration ; ce: non-permeabilized cells -'''[[SUIT-003]]''')
SUIT-003 AmR ce D059 + ('''B:''' Experimental control for [[SUIT-003 AmR ce D058]])
1PGM;2D;3S;4Rot;5U- + ('''C''')
SUIT-003 Ce1;ce1P;ce3U;ce4Glc;ce5M;ce6Rot;ce7S;1Dig;1c;2Ama;3AsTm;4Azd + ('''C''' '''[[SUIT-003]]''' Coupling-control protocol and respirometric cell viability test (CCV protocol) without oligomycin.)
SUIT-003 O2 ce-pce D018 + ('''C''' '''[[SUIT-003]]''' Second version of the Coupling-control protocol and respirometric cell viability test '''(CCV protocol)''')
SUIT-003 O2 ce-pce D013 + ('''C''' - '''[[SUIT-003]]''')
1OctM;2D;3PG;4S;5U;6Rot- + ('''C''' [[MiPNet18.13 IOC84 Alaska]])
1PGM;2D;3U;4S;5Rot- + ('''C''' [[MiPNet18.13 IOC84 Alaska]])
SUIT-028 + ('''C''' [[MiPNet18.13 IOC84 Alaska]])
O2k-Main Power Cable + ('''Product details and purchase informatio … '''Product details and purchase information''' - [https://www.oroboros.at/index.php/product/o2k-main-power-cable230-veurope/ O2k-Main Power Cable\230 V\Europe], [https://www.oroboros.at/index.php/product/o2k-main-power-cable120-vus-ca/ O2k-Main Power Cable\120 V\US-CA], or [https://www.oroboros.at/index.php/product/o2k-main-power-cable230-vau-nz/ O2k-Main Power Cable\230 V\AU-NZ]-vau-nz/ O2k-Main Power Cable\230 V\AU-NZ])
PB Light Source + ('''Product details and purchase informatio … '''Product details and purchase information''' - [https://www.oroboros.at/index.php/product/pb-light-source-blue/ PB Light Source, blue], [https://www.oroboros.at/index.php/product/pb-light-source-red/ PB Light Source, red], [https://www.oroboros.at/index.php/product/pb-light-source-white/PB Light Source, white]light-source-white/PB Light Source, white])
O2k-chamber + ('''Product details and purchase information''' - [https://www.oroboros.at/index.php/product/o2k-chamber/ O2k-Chamber (2.0 mL)], [https://www.oroboros.at/index.php/product/o2k-chamber-sv/ O2k-Chamber sV (0.5 mL)])
Shredder-Tubes + ('''Product details and purchase information''' - [https://www.oroboros.at/index.php/product/shredder-tube-ft500-pms/ Shredder Tube FT500-PMS],[https://www.oroboros.at/index.php/product/shredder-tube-ft500-ps/ Shredder Tube FT500-PS],)
Polishing Powder + ('''Product details and purchase information''' - [https://www.oroboros.at/index.php/product/orobopos-polishing-powder/ Polishing Powder 0.3 µm], [https://www.oroboros.at/index.php/product/polishing-powder-0-05/ Polishing Powder 0.05 µm])
SUIT-004 O2 pfi D010 + ('''[[SUIT-004]]''' - Short protocol linked to [[SUIT-001 O2 pfi D002]] '''SUIT RP1''' (human skeletal muscle))
Reverse electron flow from CII to CI + ( * <div>[https://wiki.oroboros.at/in … * <div>[https://wiki.oroboros.at/index.php/Gnaiger_2012_MitoPathways Gnaiger 2012 MitoPathways]</div>* [https://wiki.oroboros.at/index.php/Komlodi_2018_J_Bioenerg_Biomembr Komlodi_2018_J_Bioenerg_Biomembr]* [https://wiki.oroboros.at/index.php/Makrecka-Kuka_2015_Biomolecules Makrecka-Kuka_2015_Biomolecules]* [https://wiki.oroboros.at/index.php/Tretter_2012_Free_Radic_Biol_Med Tretter_2012_Free_Radic_Biol_Med]* [https://onlinelibrary.wiley.com/doi/full/10.1111/j.1471-4159.2006.04223.x Tretter_2006_J_Neurochem]* [[Amplex UltraRed]][[Amplex UltraRed]] )
Pressure + ( * Gnaiger E (2020) Mitochondrial pathways … * Gnaiger E (2020) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 5th ed. https://doi.org/10.26124/bec:2020-0002* Gnaiger E (1989) Mitochondrial respiratory control: energetics, kinetics and efficiency. In: Energy transformations in cells and organisms. Wieser W, Gnaiger E (eds), Thieme, Stuttgart:6-17. - [[Gnaiger 1989 Energy Transformations |»Bioblast link«]][[Gnaiger 1989 Energy Transformations |»Bioblast link«]] )
Free activity + ( * Gnaiger E (2020) Mitochondrial pathways … * Gnaiger E (2020) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 5th ed. https://doi.org/10.26124/bec:2020-0002* Gnaiger E (1989) Mitochondrial respiratory control: energetics, kinetics and efficiency. In: Energy transformations in cells and organisms. Wieser W, Gnaiger E (eds), Thieme, Stuttgart:6-17. - [[Gnaiger 1989 Energy Transformations |»Bioblast link«]][[Gnaiger 1989 Energy Transformations |»Bioblast link«]] )
Partial oxygen pressure + ( * Gnaiger E (2020) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 5th ed. https://doi.org/10.26124/bec:2020-0002 )
Units in figures and tables + ( * [[Bureau International des Poids et Mesures 2019 The International System of Units (SI)| Bureau International des Poids et Mesures (2019) The International System of Units (SI). 9th edition:117-216. ISBN 978-92-822-2272-0]] … * [[Bureau International des Poids et Mesures 2019 The International System of Units (SI)| Bureau International des Poids et Mesures (2019) The International System of Units (SI). 9th edition:117-216. ISBN 978-92-822-2272-0]] * Gnaiger E (2021) The elementary unit — canonical reviewer's comments on: Bureau International des Poids et Mesures (2019) The International System of Units (SI) 9th ed. https://doi.org/10.26124/mitofit:200004.v2 https://doi.org/10.26124/mitofit:200004.v2 )

(-5B-5BMitoKit-2DCII-5D-5D,-20-5B-5BEhinger-202016-20Nat-20Commun-5D-5D)

Reproducibility crisis + ( ::1. Ioannidis JPA (2005) Why most publis … ::1. Ioannidis JPA (2005) Why most published research findings are false. PLoS Med 2:e124. https://doi.org/10.1371/journal.pmed.0020124::2. Stanley EL (2016) Experimental design for laboratory biologists. Maximizing information and improving reproducibility. Cambridge University Press.::3. [https://www.nature.com/news/1-500-scientists-lift-the-lid-on-reproducibility-1.19970 Baker M (2016) 1,500 scientists lift the lid on reproducibility. Survey sheds light on the ‘crisis’ rocking research. Nature 533:452–4.]risis’ rocking research. Nature 533:452–4.] )
Chloroplasts + ( :::: )
Mitochondria + ( :::: Gnaiger Erich et al ― MitoEAGLE Task Group (2020) Mitochondrial physiology. Bioenerg Commun 2020.1. doi:10.26124/bec:2020-0001.v1. - [[BEC 2020.1 doi10.26124bec2020-0001.v1 |»BEC 2020.1«]] )
Photorespiration + ( :::: Stern K (2003) Introductory plant biology. McGraw-Hill, New York. ISBN 978-0-07-290941-8. )
Photosynthesis + ( ::::Stern K (2003) Introductory plant biology. McGraw-Hill, New York. ISBN 978-0-07-290941-8. )
Energy saving in research + ( [1] Meadows DH, Meadows DL, Ran … [1] Meadows DH, Meadows DL, Randers J, Behrens III WW (1972) The limits to growth; a report for the Club of Rome's project on the predicament of mankind. ISBN 0876631650 - [[Meadows 1972 Universe Books |»Bioblast link«]] [2] Gnaiger E (2021) Beyond counting papers – a mission and vision for scientific publication. https://doi.org/10.26124/bec:2021-0005ic publication. https://doi.org/10.26124/bec:2021-0005)
Heat + (Energy)
Internal-energy + ([[Energy]])
Gibbs energy + ([[Energy]])
Affinity of reaction + ([[Force]])
Statistical significance + (Amrhein V, Greenland S, McShane B (2019) Scientists rise up against statistical significance. Nature 567:305-7. - [[Amrhein 2019 Nature |»Bioblast link«]])
Liver mitochondria purification + (Armstrong C, Staples JF (2010) The role of succinate dehydrogenase and oxaloacetate in mitochondrial metabolism during mammalian hibernation and arousal. J Comp Physiol B 180: 775-783.)
Second + (Bureau International des Poids et Mesures (2019) The International System of Units (SI). 9th edition:117-216 ISBN 978-92-822-2272-0. - [https://www.bipm.org/utils/common/pdf/si-brochure/SI-Brochure-9-EN.pdf »Open Access pdf«])
% + (Bureau International des Poids et Mesures (2019) The International System of Units (SI). 9th edition:117-216. ISBN 978-92-822-2272-0 - [[Bureau International des Poids et Mesures 2019 The International System of Units (SI) |»Bioblast link«]])
SUIT-024 O2 ce-pce D056 + (Determination of the presence of ATPases in [[mitochondrial preparations]] - '''[[SUIT-024]]''')
Intensive quantity + (Gnaiger E (1993) Nonequilibrium thermodynamics of energy transformations. Pure Appl Chem 65:1983-2002. http://dx.doi.org/10.1351/pac199365091983)
Paywall journalism + (Gnaiger E (2019) Editorial: A vision on preprints for mitochondrial physiology and bioenergetics. https://doi.org/10.26124/mitofit:190002.v2)
Living Communications + (Gnaiger E (2021) Beyond counting papers – a mission and vision for scientific publication. https://doi.org/10.26124/bec:2021-0005)
Elementary unit + (Gnaiger E (2021) The elementary unit — canonical reviewer's comments on: Bureau International des Poids et Mesures (2019) The International System of Units (SI) 9th ed. https://doi.org/10.26124/mitofit:200004.v2)
Substrates as electron donors + (Gnaiger E (2023) Complex II ambiguities ― FADH2 in the electron transfer system. MitoFit Preprints 2023.3.v3. https://doi.org/10.26124/mitofit:2023-0003.v3)
Complex II ambiguities + (Gnaiger E (2024) Complex II ambiguities ― FADH2 in the electron transfer system. J Biol Chem 300: 105470. https://doi.org/10.1016/j.jbc.2023.105470)
Ambiguity crisis + (Gnaiger E (2024) Complex II ambiguities ― FADH2 in the electron transfer system. J Biol Chem 300:105470. https://doi.org/10.1016/j.jbc.2023.105470)
Mitochondrial states and rates - terminology beyond MitoEAGLE 2020 + (Gnaiger E et al ― MitoEAGLE Task Group (2020) Mitochondrial physiology. Bioenerg Commun 2020.1. https://doi.org/10.26124/bec:2020-0001.v1)
Matrix-ETS + (Gnaiger E et al ― MitoEAGLE Task Group (2020) Mitochondrial physiology. Bioenerg Commun 2020.1. https://doi.org/10.26124/bec:2020-0001.v1)
Oxygen flow + (Gnaiger E et al ― MitoEAGLE Task Group (20 … Gnaiger E et al ― MitoEAGLE Task Group (2020) Mitochondrial physiology. Bioenerg Commun 2020.1. https://doi.org/10.26124/bec:2020-0001.v1, Gnaiger E (2021) The elementary unit — canonical reviewer's comments on: Bureau International des Poids et Mesures (2019) The International System of Units (SI) 9th ed. https://doi.org/10.26124/mitofit:200004.v2, [[Gnaiger 2020 BEC MitoPathways]], [[Gnaiger_1993_Pure Appl Chem]], [[Renner_2003_Biochim_Biophys_Acta]]nner_2003_Biochim_Biophys_Acta]])
Fura2 + (Grynkiewicz G, Poenie M, Tsien RY. (1985) A new generation of Ca2+ indicators with greatly improved fluorescence properties. J Biol Chem 260(6): 3440-50. [http://www.jbc.org/content/260/6/3440.full.pdf+html])
Free radicals + (Halliwell et al 2001)
Hydronium ion + (Headrick JM, Diken EG, Walters RS, Hammer NI, Christie RA, Cui J, Myshakin EM, Duncan MA, Johnson MA, Jordan KD (2005) Spectral signatures of hydrated proton vibrations in water clusters. Science 308:1765–69.)
Coenzyme Q + (Komlódi T, Cardoso LHD, Doerrier C, Moore AL, Rich PR, Gnaiger E (2021) Coupling and pathway control of coenzyme Q redox state and respiration in isolated mitochondria. Bioenerg Commun 2021.3. https://doi.org/10.26124/bec:2021-0003)
Amplex UltraRed + (Komlódi T, Sobotka O, Gnaiger E (2021) Facts and artefacts on the oxygen dependence of hydrogen peroxide production using Amplex UltraRed. https://doi.org/10.26124/bec:2021-0004)
Intrinsic fluorophores + (Lakowicz JR (2006) Principles of Fluorescence Spectroscopy, 3rd ed. Springer, Berlin)
Phosphoenolpyruvate carboxykinase + (Lehninger 1970 Worth Publishers)
MitoFit DOI Data Center + (MitoFit DOI Data Center)
MitoFit Preprints + (MitoFit Preprints)
PBI-Shredder O2k-Set + (No longer available for purchase)
Optics + (Owen T (1996) Fundamentals of modern UV-visible spectroscopy. A Primer. Hewlett Packard, 142pp.)
Stray light + (Owen T (1996) Fundamentals of modern UV-visible spectroscopy. A Primer. Hewlett Packard, 142pp.)
Linearity + (Paul WL (1991) USP perspectives on analytical methods evaluation. Pharm. Technol. 15: 130-141. Elwell CE (1995) A practical users guide to near infrared spectroscopy. Hamamatsu Photonics, 155pp.)
Selectivity + (Paul WL (1991) USP perspectives on analytical methods evaluation. Pharm. Technol. 15: 130-141.)
Sensitivity + (Paul WL (1991) USP perspectives on analytical methods evaluation. Pharm. Technol. 15: 130-141.)
RS232-Cable + (Previous Product ID 21210-01)
DatLab-Upgrading\4.x-5.2 + (Previous Product ID 27141-43)
PH combination electrode 70/5 mm + (Previous Product ID 30501-24, [[O2k-pH ISE-Module| pH and Oxygen @Oroboros ]])
PH combination electrode 150/6 mm + (Previous Product ID 30502-24, [[O2k-pH ISE-Module|pH and Oxygen]])
Test + (Ref)
Perfluorooctanoic acid + (Shabalina et al (2016) Arch Toxicol)
HPTS + (Sigma: H1529-1G)
Euthanyl/Pentobarbitol + (Takaki M, Nakahara H, Kawatani Y, Utsumi K, Suga H (1997) No suppression of respiratory function of mitochondria isolated from the hearts of anesthetized rats with high-dose pentobarbital sodium. Jpn J Physiol 47:87–92)
Methylmalonic acid + (Tretter 2013 Abstract MiP2013 __TOC__)
Acyl-CoA dehydrogenase + (Wanders RJ, Ruiter JP, IJLst L, Waterham H … Wanders RJ, Ruiter JP, IJLst L, Waterham HR, Houten SM (2010) The enzymology of mitochondrial fatty acid beta-oxidation and its application to follow-up analysis of positive neonatal screening results. J Inherit Metab Dis 33:479-94. doi: 10.1007/s10545-010-9104-8. PMID: 20490924 10.1007/s10545-010-9104-8. PMID: 20490924)