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From Bioblast
 YearReferenceCouplingPathwayPreparationOrganismTissue;cell
Crouch 2017 PLOS ONE2017Crouch ML, Knowels G, Stuppard R, Ericson NG, Bielas JH, Marcinek DJ, Syrjala KL (2017) Cyclophosphamide leads to persistent deficits in physical performance and in vivo mitochondria function in a mouse model of chemotherapy late effects. PLOS ONE 12:e0181086.LEAK
OXPHOS
ET
N
NS
Permeabilized tissueMouseSkeletal muscle
Crowder 2022 Islets2022Crowder JJ, Zeng Z, Novak AN, Alves NJ, Linnemann AK (2022) Stabilization protects islet integrity during respirometry in the Oroboros Oxygraph-2K analyzer. Islets 14:128-38.LEAK
ROUTINE
ET
ROXIntact cellsMouseIslet cell;pancreas;thymus
Cruz 2018 Chem Biol Interact2018Cruz LC, Ecker A, Rodrigues NR, Martins IK, Posser T, Maciel FE, Vargas MA, Barbosa NV, Franco JL (2018) Honey protects against wings posture error and molecular changes related to mitochondrial pathways induced by hypoxia/reoxygenation in adult Drosophila melanogaster. Chem Biol Interact 291:245-52.LEAK
OXPHOS
ET
N
NS
Isolated mitochondriaDrosophila
Cruz 2020 Cancers (Basel)2020Cruz B, Oliveira A, Viana LR, Lopes-Aguiar L, Canevarolo R, Colombera MC, Valentim RR, Garcia-Fóssa F, de Sousa LM, Castelucci BG, Consonni SR, Martins-de-Souza D, de Jesus MB, Russell ST, Gomes-Mardondes MCC (2020) Leucine-tich diet modulates the metabolomic and proteomic profile of skeletal muscle during cancer cachexia. Cancers (Basel) 12:E1880.LEAK
ROUTINE
ET
Intact cellsMouseSkeletal muscle
Cruz 2020 Drug Alcohol Depend2020Cruz JV, Maba IK, Correia D, Kaziuk FD, Cadena SMSC, Zampronio AR (2020) Intermittent binge-like ethanol exposure during adolescence attenuates the febrile response by reducing brown adipose tissue thermogenesis in rats. Drug Alcohol Depend 209:107904.LEAK
OXPHOS
NIsolated mitochondriaRatFat
Cruz-Gregorio 2019 Biomolecules2019Cruz-Gregorio A, Aranda-Rivera AK, Aparicio-Trejo OE, Coronado-Martinez I, Pedraza-Chaverri J, Lizano M (2019) E6 oncoproteins from high-risk human papillomavirus induce mitochondrial metabolism in a head and neck squamous cell carcinoma model. Biomolecules 9:E351.LEAK
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CIV
ROX
Intact cellsHumanEndothelial;epithelial;mesothelial cell
Cruz-Gregorio 2022 Antioxidants (Basel)2022Cruz-Gregorio A, Aranda-Rivera AK, Aparicio-Trejo OE, Medina-Campos ON, Sciutto E, Fragoso G, Pedraza-Chaverri J (2022) GK-1 Induces oxidative stress, mitochondrial dysfunction, decreased membrane potential, and impaired autophagy flux in a mouse model of breast cancer. https://doi.org/10.3390/antiox12010056LEAK
OXPHOS
N
ROX
Isolated mitochondriaMouseEndothelial;epithelial;mesothelial cell
Cruz-Gregorio 2023 Phytother Res2023Cruz-Gregorio A, Aranda-Rivera AK, Aparicio-Trejo OE, Medina-Campos ON, Sciutto E, Fragoso G, Pedraza-Chaverri J (2023) α-Mangostin induces oxidative damage, mitochondrial dysfunction, and apoptosis in a triple-negative breast cancer model. https://doi.org/10.1002/ptr.7812LEAK
ROUTINE
ET
ROX
CIV
Intact cellsMouseEndothelial;epithelial;mesothelial cell
Cubizolle 2020 J Cell Mol Med2020Cubizolle A, Cia D, Moine E, Jacquemot N, Guillou L, Rosell M, Angebault-Prouteau C, Lenaers G, Meunier I, Vercauteren J, Durand T, Crauste C, Brabet P (2020) Isopropyl-phloroglucinol-DHA protects outer retinal cells against lethal dose of all-trans-retinal. J Cell Mol Med 24:5057-69.LEAK
OXPHOS
ET
N
S
CIV
NS
Permeabilized cellsRatEndothelial;epithelial;mesothelial cell
Cunatova 2018 Thesis2018Čunátová K (2018) The role of tissue specific isoforms of subunit 4 in assembly and function of cytochrome c oxidase. PhD Thesis p107.LEAK
ROUTINE
ET
CIV
ROX
Intact cellsHumanHEK
Cunha 2017 Int J Biol Macromol2017Cunha de Padua MM, Suter Correia Cadena SM, de Oliveira Petkowicz CL, Martinez GR, Rodrigues Noleto G (2017) Galactomannan from Schizolobium amazonicum seed and its sulfated derivatives impair metabolism in HepG2 cells. Int J Biol Macromol 101:64-473.LEAK
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ROXIntact cellsHumanLiver
Cunha de Padua 2017 Carbohydr Polym2017Cunha de Padua MM, Suter Correia Cadena SM, de Oliveira Petkowicz CL, Martinez GR, Rodrigues Noleto G (2017) Toxicity of native and oxovanadium (IV/V) galactomannan complexes on HepG2 cells is related to impairment of mitochondrial functions. Carbohydr Polym 173:665-75.LEAK
ROUTINE
ET
ROXHumanLiver
Cunha-de 2017 Thesis2017Cunha-de Padua MM (2017) Mecanismos citotóxicos da galactomanana de sementes de Schizolobium amazonicum e seus complexos com oxovanádio em células de hepatocarcinoma humano (HepG2) e efeito do silenciamento da enzima glucose-6-fosfato isomerase (GPI) na sobrevivência de células de adenocarcinoma de cólon humano (LS174T). Doctoral Thesis p160.LEAK
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N
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Intact cells
Permeabilized cells
HumanLiver
Other cell lines
Curti 1997 Neurosci Lett1997Curti D, Rognoni F, Gasparini L, Cattaneo A, Paolillo M, Racchi M, Zani L, Bianchetti A, Trabucchi M, Bergamaschi S, Govoni S (1997) Oxidative metabolism in cultured fibroblasts derived from sporadic Alzheimer's disease (AD) patients. Neurosci Lett 236:13-6.LEAKFIntact organismHumanHeart
Czerniczyniec 2015 Brain Res2015Czerniczyniec A, La Padula P, Bustamante J, Karadayian AG, Lores-Arnaiz S, Costa LE (2015) Mitochondrial function in rat cerebral cortex and hippocampus after short- and long-term hypobaric hypoxia. Brain Res 1598:66-75.LEAK
OXPHOS
NIsolated mitochondriaRatNervous system
Czerniczyniec 2015 J Bioenerg Biomembr2015Czerniczyniec A, Lanza EM, Karadayian AG, Bustamante J, Lores-Arnaiz S (2015) Impairment of striatal mitochondrial function by acute paraquat poisoning. J Bioenerg Biomembr 47:395-408.LEAK
OXPHOS
N
ROX
Isolated mitochondriaRatNervous system
Czyzowska 2023 Redox Biol2023Czyżowska A, Brown J, Xu H, Sataranatarajan K, Kinter M, Tyrell VJ, O'Donnell VB, Van Remmen H (2023) Elevated phospholipid hydroperoxide glutathione peroxidase (GPX4) expression modulates oxylipin formation and inhibits age-related skeletal muscle atrophy and weakness. https://doi.org/10.1016/j.redox.2023.102761LEAK
OXPHOS
N
S
NS
ROX
Permeabilized tissueMouseSkeletal muscle
D'Souza 2018 J Lipid Res2018D'Souza K, Nzirorera C, Cowie AM, Varghese GP, Trivedi P, Eichmann TO, Biswas D, Touaibia M, Morris AJ, Aidinis V, Kane DA, Pulinilkunnil T, Kienesberger PC (2018) Autotaxin-LPA signaling contributes to obesity-induced insulin resistance in muscle and impairs mitochondrial metabolism. J Lipid Res 59:1805-17.LEAK
OXPHOS
F
N
S
ROX
Permeabilized tissueMouseSkeletal muscle
D'Souza 2020 Nutrients2020D'Souza K, Mercer A, Mawhinney H, Pulinilkunnil T, Udenigwe CC, Kienesberger PC (2020) Whey peptides stimulate differentiation and lipid metabolism in adipocytes and ameliorate lipotoxicity-induced insulin resistance in muscle cells. Nutrients 12:E425.LEAK
ET
F
N
Permeabilized cellsMouseSkeletal muscle
Fat
D'Urso 2020 Surg Endosc2020D'Urso A, Agnus V, Barberio M, Seeliger B, Marchegiani F, Charles AL, Geny B, Marescaux J, Mutter D, Diana M (2020) Computer-assisted quantification and visualization of bowel perfusion using fluorescence-based enhanced reality in left-sided colonic resections. Surg Endosc 35:4321-31.LEAK
OXPHOS
N
NS
HumanEndothelial;epithelial;mesothelial cell
Da Silva 2017 Neurotox Res2017Da Silva JC, Amaral AU, Cecatto C, Wajner A, Dos Santos Godoy K, Ribeiro RT, de Mello Gonçalves A, Zanatta Â, da Rosa MS, Loureiro SO, Vargas CR, Leipnitz G, de Souza DOG, Wajner M (2017) α-Ketoadipic acid and α-aminoadipic acid cause disturbance of glutamatergic neurotransmission and induction of oxidative stress in vitro in brain of adolescent rats. Neurotox Res 32:276-90.LEAK
OXPHOS
ET
NIsolated mitochondria
Homogenate
RatNervous system
Dabbaghizadeh 2018 PLOS ONE2018Dabbaghizadeh A, Morrow G, Amer YO, Chatelain EH, Pichaud N, Tanguay RM (2018) Identification of proteins interacting with the mitochondrial small heat shock protein Hsp22 of Drosophila melanogaster: Implication in mitochondrial homeostasis. PLOS ONE 13:e0193771.LEAK
ROUTINE
ET
ROXIntact cellsHumanHeLa
Dabrowska 2023 Int J Mol Sci2023Dabrowska A, Zajac M, Bednarczyk P, Lukasiak A (2023) Effect of quercetin on mitoBKCa channel and mitochondrial function in human bronchial epithelial cells exposed to particulate matter. Int J Mol Sci 24:638. https://doi.org/10.3390/ijms24010638LEAK
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S
ROX
Permeabilized cells
Intact cells
HumanLung;gill
Endothelial;epithelial;mesothelial cell
Dahl 2015 Acta Physiol (Oxf)2015Dahl R, Larsen S, Dohlmann TL, Qvortrup K, Helge JW, Dela F, Prats C (2015) Three dimensional reconstruction of the human skeletal muscle mitochondrial network as a tool to assess mitochondrial content and structural organization. Acta Physiol (Oxf) 213:145-55.LEAK
OXPHOS
ET
N
CIV
NS
Permeabilized tissueHumanSkeletal muscle
Dahlke 2017 Glob Chang Biol2017Dahlke FT, Leo E, Mark FC, Pörtner HO, Bickmeyer U, Frickenhaus S, Storch D (2017) Effects of ocean acidification increase embryonic sensitivity to thermal extremes in Atlantic cod, Gadus morhua. Glob Chang Biol 23(4):1499-1510.LEAK
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ROX
HomogenateFishes
Dall 2019 J Biol Chem2019Dall M, Trammell SAJ, Asping M, Hassing AS, Agerholm M, Vienberg SG, Gillum MP, Larsen S, Treebak JT (2019) Mitochondrial function in liver cells is resistant to perturbations in NAD+ salvage capacity. J Biol Chem 294:13304-26.LEAK
OXPHOS
ET
F
N
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Intact cellsMouseLiver
Dall 2021 J Biol Chem2021Dall M, Hassing AS, Niu L, Nielsen TS, Ingerslev LR, Sulek K, Trammell SAJ, Gillum MP, Barrès R, Larsen S, Poulsen SS, Mann M, Ørskov C, Treebak JT (2021) Hepatocyte-specific perturbation of NAD+ biosynthetic pathways in mice induces reversible nonalcoholic steatohepatitis-like phenotypes. J Biol Chem 297:101388.LEAK
OXPHOS
ET
N
NS
Intact cellsMouseLiver
Dallon 2017 Biochem J2017Dallon BW, Parker BA, Hodson AE, Tippetts TS, Harrison ME, Appiah MMA, Witt JE, Gibbs JL, Gray HM, Sant TM, Bikman BT (2017) Insulin selectively reduces mitochondrial uncoupling in brown adipose tissue in mice. Biochem J 475:561-9.LEAK
OXPHOS
ET
N
NS
ROX
Permeabilized tissueMouseSkeletal muscle
Fat
Damgaard 2022 iScience2022Damgaard MV, Nielsen TS, Basse AL, Chubanava S, Trost K, Moritz T, Dellinger RW, Larsen S, Treebak JT (2022) Intravenous nicotinamide riboside elevates mouse skeletal muscle NAD+ without impacting respiratory capacity or insulin sensitivity. https://doi.org/10.1016/j.isci.2022.103863LEAK
OXPHOS
N
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ROX
Permeabilized tissueMouseSkeletal muscle
Damiano 2014 PLoS One2014Damiano M, Gautier CA, Bulteau AL, Ferrando-Miguel R, Gouarne C, Paoli MG, Pruss R, Auchère F, L'Hermitte-Stead C, Bouillaud F, Brice A, Corti O, Lombès A (2014) Tissue- and cell-specific mitochondrial defect in Parkin- deficient mice. PLoS One 9:e99898.LEAK
OXPHOS
ET
N
ROX
Isolated mitochondriaMouseNervous system
Dandanell 2018 Scand J Med Sci Sports2018Dandanell S, Meinild-Lundby AK, Andersen AB, Lang PF, Oberholzer L, Keiser S, Robach P, Larsen S, Rønnestad BR, Lundby C (2018) Determinants of maximal whole-body fat oxidation in elite cross-country skiers: role of skeletal muscle mitochondria. Scand J Med Sci Sports 28:2494-504.LEAK
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F
N
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Permeabilized tissueHumanSkeletal muscle
Dannheisig 2019 Cells2019Dannheisig DP, Beck E, Calzia E, Walther P, Behrends C, Pfister AS (2019) Loss of Peter Pan (PPAN) affects mitochondrial homeostasis and autophagic flux. Cells 8:E894.LEAK
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ROX
Intact cells
Permeabilized cells
HumanHeLa
Daradics 2022 PLoS One2022Daradics N, Horvath G, Tretter L, Paal A, Fulop A, Budai A, Szijarto A (2022) The effect of Cyclophilin D depletion on liver regeneration following associating liver partition and portal vein ligation for staged hepatectomy. https://doi.org/10.1371/journal.pone.0271606LEAK
OXPHOS
N
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Isolated mitochondriaMouseLiver
Darrah-Wiedemeier 2015 Graduate Theses and Dissertations2015Darrah-Wiedemeier KL (2015) The physiological effects of the seed treatment Stamina on maize seedling length, ADP:O ratios, and respiration rates. Graduate Theses and Dissertations Paper 14673:55 pp.LEAK
OXPHOS
SIsolated mitochondriaPlants
Darrell 2017 US Patent2017Neufer PD, Anderson EJ, Szeto HH (2017) Methods for preventing or treating insulin resistance. US Patent US20170100450 A1.LEAK
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F
N
S
ROX
Permeabilized tissueHuman
Rat
Skeletal muscle
Datzmann 2019 J Neurosurg2019Datzmann T, Kapapa T, Scheuerle A, McCook O, Merz T, Unmuth S, Hoffmann A, Mathieu R, Mayer S, Mauer UM, Roehrer S, Yilmazer-Hanke D, Moeller P, Nussbaum BL, Calzia E, Groeger M, Hartmann C, Radermacher P, Wepler M (2019) In-depth characterization of a long-term, resuscitated model of acute subdural hematoma-induced brain injury. https://doi.org/10.3171/2019.9.jns191789LEAK
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N
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HomogenatePigNervous system
Datzmann 2019 Pharmacol Res2019Datzmann T, Hoffmann A, McCook O, Merz T, Wachter U, Preuss J, Vettorazzi S, Calzia E, Gröger M, Kohn F, Schmid A, Denoix N, Radermacher P, Wepler M (2019) Effects of sodium thiosulfate (Na2S2O3) during resuscitation from hemorrhagic shock in swine with preexisting atherosclerosis. Pharmacol Res 151:104536.LEAK
OXPHOS
N
NS
HomogenatePigHeart
Liver
Kidney
Daura 2021 Neurobiol Dis2021Daura E, Tegelberg S, Yoshihara M, Jackson C, Simonetti F, Aksentjeff K, Ezer S, Hakala P, Katayama S, Kere J, Lehesjoki AE, Joensuu T (2021) Cystatin B-deficiency triggers ectopic histone H3 tail cleavage during neurogenesis. Neurobiol Dis 156:105418.LEAK
OXPHOS
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N
CIV
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Permeabilized cellsMouseStem cells
Nervous system
Davidson 2020 Circ Res2020Davidson MT, Grimsrud P, Lai L, Draper J, Fisher-Wellman KH, Narowski TM, Koves TR, Kelly DP, Muoio DM (2020) Extreme acetylation of the cardiac mitochondrial proteome does not promote heart failure. Circ Res 127:1094-108.LEAKF
N
Isolated mitochondriaMouseHeart
Davies 2016 Abstract Proceedings of The Physiological SocietyDevelopment of mitochondrial function in the cortex and cerebellum of the ovine fetus.LEAK
OXPHOS
N
S
NS
HomogenateBovinesNervous system
Davies 2021 FASEB J2021Davies KL, Smith DJ, El-Bacha T, Stewart ME, Easwaran A, Wooding PFP, Forhead AJ, Murray AJ, Fowden AL, Camm EJ (2021) Development of cerebral mitochondrial respiratory function is impaired by thyroid hormone deficiency before birth in a region-specific manner. FASEB J 35:21591.LEAK
OXPHOS
N
S
NS
HomogenateOther mammalsNervous system
Davies 2022 Biomolecules2022Davies KL, Smith DJ, El-Bacha T, Wooding PFP, Forhead AJ, Murray AJ, Fowden AL, Camm EJ (2022) Cortisol regulates cerebral mitochondrial oxidative phosphorylation and morphology of the brain in a region-specific manner in the ovine fetus. https://doi.org/10.3390/biom12060768LEAK
OXPHOS
N
S
NS
HomogenateOther mammalsNervous system
Davila 2018 Elife2018Davila A, Liu L, Chellappa K, Redpath P, Nakamaru-Ogiso E, Paolella LM, Zhang Z, Migaud ME, Rabinowitz JD, Baur JA (2018) Nicotinamide adenine dinucleotide is transported into mammalian mitochondria. Elife 7:e33246.LEAK
OXPHOS
ET
NIsolated mitochondriaMouseSkeletal muscle
Liver
Davis 2017 Tissue Eng Part C Methods2017Davis BN, Santoso JW, Walker MJ, Cheng CS, Koves TR, Kraus WE, Truskey GA (2017) Human, tissue-engineered, skeletal muscle myobundles to measure oxygen uptake and assess mitochondrial toxicity. Tissue Eng Part C Methods 23:189-99.LEAK
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ROXIntact cellsHumanSkeletal muscle
Davis 2018 FASEB J2018Davis RAH, Deemer SE, Bergeron JM, Little JT, Warren JL, Fisher G, Smith DL Jr, Fontaine KR, Dickinson SL, Allison DB, Plaisance EP (2018) Dietary R, S-1,3-butanediol diacetoacetate reduces body weight and adiposity in obese mice fed a high-fat diet. FASEB J 33:2409-21.LEAK
OXPHOS
N
NS
Permeabilized tissueMouseSkeletal muscle
Davis 2021 Comparative Exercise Physiology2021Davis Michael, Barrett Montana, Popken Andrea (2021) Effect of hyperthermia and acidosis on equine skeletal muscle mitochondrial oxygen consumption. Comparative Exercise Physiology 17:171-179.LEAK
OXPHOS
ET
N
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Permeabilized cellsHorseSkeletal muscle
Davis 2021 J Appl Physiol2021Davis MS, Barrett MR (2021) Effect of conditioning and physiology hyperthermia on canine skeletal muscle mitochondrial oxygen consumption. J Appl Physiol. 130:1317-1325LEAK
OXPHOS
N
S
NS
Permeabilized cellsDogSkeletal muscle
Davis 2023 Am J Physiol Regul Integr Comp Physiol .2023Davis MS, Bayly WM, Hansen CM, Barrett MR, Blake CA (2023) Effects of hyperthermia and acidosis on mitochondrial production of reactive oxygen species. Am J Physiol Regul Integr Comp Physiol . 325(6):R725-R734.LEAK
OXPHOS
N
S
NS
Isolated mitochondriaHorseSkeletal muscle
Davis 2023 MitoFit2023Davis MS, Barrett MR, Bayly WM, Bolinger A (2023) Effect of selected fluorophores on equine skeletal muscle mitochondrial respiration. MitoFit Preprints 2023.5. https://doi.org/10.26124/mitofit:2023-00052024-04-25 published in Bioenerg Commun 2024.2.LEAK
OXPHOS
N
S
Isolated mitochondriaHorseSkeletal muscle
Davis 2024 BEC2024Davis MS, Barrett MR, Bayly WM, Bolinger A (2024) Effect of selected fluorophores on equine skeletal muscle mitochondrial respiration. Bioenerg Commun 2024.2. https://doi.org/10.26124/bec:2024-0002LEAK
OXPHOS
N
S
Isolated mitochondriaHorseSkeletal muscle
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