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ResultCodeDebugExtra

To embed this query inline into a wiki page use the code below.

{{#ask: [[Category:Publications]] [[Coupling states::LEAK]] [[Coupling states::ROUTINE]]
 |?Was published in year=Year
 |?Has title=Reference
 |?Mammal and model
 |?Tissue and cell
 |?Stress
 |?Diseases
 |format=broadtable
 |limit=50
 |offset=500
 |sort=Was published in year
 |order=descending
 |mainlabel=
}}

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Query log

{
    "query_string": "[[Category:Publications]] [[Coupling states::LEAK]] [[Coupling states::ROUTINE]]",
    "query_source": "SMWSQLStore",
    "query_time": "0.0513",
    "from_cache": false
}

Debug output SQLStore

ASK Query

[[Category:Publications]] [[Coupling states::LEAK]] [[Coupling states::ROUTINE]]

SQL Query

SELECT DISTINCT
t0.smw_id AS id,
  t0.smw_title AS t,
  t0.smw_namespace AS ns,
  t0.smw_iw AS iw,
  t0.smw_subobject AS so,
  t0.smw_sortkey AS sortkey, t9.o_hash
FROM
`smw_object_ids` AS t0
INNER JOIN
(`smw_fpt_inst` AS t2
INNER JOIN
`t3` AS t3 ON t2.o_id=t3.id
INNER JOIN
`smw_di_blob` AS t4 ON t2.s_id=t4.s_id
INNER JOIN
`smw_di_blob` AS t6 ON t2.s_id=t6.s_id) ON t0.smw_id=t2.s_id
INNER JOIN
`smw_di_blob` AS t9 ON t0.smw_id=t9.s_id
WHERE
(
   ((t4.o_hash='LEAK') AND t4.p_id=80919)
   AND (
   (t6.o_hash='ROUTINE') AND t6.p_id=80919)
  )
   AND (t9.p_id=80886)
  AND t0.smw_iw!=':smw'
  AND t0.smw_iw!=':smw-delete'
  AND t0.smw_iw!=':smw-redi'
ORDER BY
t9.o_hash DESC
LIMIT
55
OFFSET
500

SQL Explain

ID	select_type	table	type	possible_keys	key	key_len	ref	rows	filtered	Extra
1	SIMPLE	t6	ref	s_id, p_id, s_id_2, o_hash	p_id	262	const, const	982	100.00	Using index condition; Using temporary; Using filesort

Auxilliary Tables

Temporary table t3
Recursively computed hierarchy for element(s) (80971).
SELECT s_id FROM `smw_fpt_subc` WHERE o_id=80971 LIMIT 1

Query Metrics

Query-Size:5
Query-Depth:1

Errors and Warnings

None

	Year	Reference	Mammal and model	Tissue and cell	Stress	Diseases
Smolkova 2015 Int J Biochem Cell Biol	2015	Smolková K, Dvořák A, Zelenka J, Vítek L, Ježek P (2015) Reductive carboxylation and 2-hydroxyglutarate formation by wild-type IDH2 in breast carcinoma cells. Int J Biochem Cell Biol 65:125-33.	Human	Endothelial;epithelial;mesothelial cell Other cell lines	Oxidative stress;RONS	Cancer
Pasdar 2015 PLoS One	2015	Pasdar EA, Smits M, Stapelberg M, Bajzikova M, Stantic M, Goodwin J, Yan B, Stursa J, Kovarova J, Sachaphibulkij K, Bezawork-Geleta A, Sobol M, Filimonenko A, Tomasetti M, Zobalova R, Hozak P, Dong LF, Neuzil J (2015) Characterisation of mesothelioma-initiating cells and their susceptibility to anti-cancer agents. PLoS One 10:e0119549.	Human Mouse	Endothelial;epithelial;mesothelial cell Other cell lines		Cancer
Peyta 2015 Biochim Biophys Acta	2015	Peyta L, Jarnouen K, Pinault M, Coulouarn C, Guimaraes C, Goupille C, de Barros JP, Chevalier S, Dumas JF, Maillot F, Hatch GM, Loyer P, Servais S (2015) Regulation of hepatic cardiolipin metabolism by TNFα: Implication in cancer cachexia. Biochim Biophys Acta 1851:1490-500.	Rat	Liver Other cell lines		Cancer
Coupling-control protocol	2015	Gnaiger E (2015) From PCP to CCP. Mitochondr Physiol Network 2015-01-11.
Llobet 2015 Dis Model Mech	2015	Llobet L, Toivonen JM, Montoya J, Ruiz-Pesini E, López-Gallardo E (2015) OXPHOS xenobiotics alter adipogenic differentiation at concentrations found in human blood. Dis Model Mech 8:1441-55.	Human	Fat Stem cells
Khiati 2015 Proc Natl Acad Sci U S A	2015	Khiati S, Baechler SA, Factor VM, Zhang H, Huang SY, Dalla Rosa I, Sourbier C, Neckers L, Thorgeirsson SS, Pommier Y (2015) Lack of mitochondrial topoisomerase I (TOP1mt) impairs liver regeneration. Proc Natl Acad Sci U S A 112:11282-7.	Human	Endothelial;epithelial;mesothelial cell Other cell lines
Sjoevall 2015 US Patent	2015	Sjövall F, Ehinger J, Hansson M, Elmer E, Batcheller DG (2018) Mitochondrial toxicity test. US Patent US20150253306 A1.	Human	Blood cells Macrophage-derived Platelet
Plecita-Hlavata 2015 Am J Respir Cell Mol Biol	2015	Plecitá-Hlavatá L, Tauber J, Li M, Zhang H, Flockton AR, Pullamsetti SS, Chelladurai P, D'alessandro A, El Kasmi KC, Ježek P, Stenmark KR (2015) Constitutive reprogramming of fibroblast mitochondrial metabolism in pulmonary hypertension. Am J Respir Cell Mol Biol 55:47-57.	Human Bovines	Endothelial;epithelial;mesothelial cell Fibroblast	Oxidative stress;RONS	Other
Bock 2015 Thesis	2015	Bock UB (2015) Auswirkung von normobarer Hyperoxie auf die mitochondriale Atmung von Alveolarmakrophagen. Dissertation p80.	Mouse	Lung;gill Macrophage-derived	Oxidative stress;RONS
Negmadjanov 2015 PLOS ONE	2015	Negmadjanov U, Godic Z, Rizvi F, Emelyanova L, Ross G, Richards J, Holmuhamedov EL, Jahangir A (2015) TGF-β1-mediated differentiation of fibroblasts is associated with increased mitochondrial content and cellular respiration. PLOS ONE 10:e0123046. doi: 10.1371/journal.pone.0123046.	Mouse	Fibroblast
Tesori 2015 Sci Rep	2015	Tesori V, Piscaglia AC, Samengo D, Barba M, Bernardini C, Scatena R, Pontoglio A, Castellini L, Spelbrink JN, Maulucci G, Puglisi MA, Pani G, Gasbarrini A (2015) The multikinase inhibitor Sorafenib enhances glycolysis and synergizes with glycolysis blockade for cancer cell killing. Sci Rep 5:9149.	Rat	Liver Other cell lines Stem cells		Cancer
Du 2015 J Biol Chem	2015	Du J, Rountree A, Cleghorn WM, Contreras L, Lindsay KJ, Sadilek M, Gu H, Djukovic D, Raftery D, Satrustegui J, Kanow M, Chan L, Tsang SH, Sweet IR, Hurley JB (2015) Phototransduction influences metabolic flux and nucleotide metabolism in mouse retina. J Biol Chem 291:4698-710.	Mouse	Nervous system Islet cell;pancreas;thymus
Kasvandik 2015 J Proteome Res	2015	Kasvandik S, Samuel K, Peters M, Eimre M, Peet N, Roost AM, Padrik L, Paju K, Peil L, Salumets A (2015) Deep quantitative proteomics reveals extensive metabolic reprogramming and cancer-like changes of ectopic endometriotic stromal cells. J Proteome Res 15:572-84.	Human	Genital Other cell lines
Sundaram 2015 Mol Microbiol	2015	Sundaram V, Petkova MI, Pujol-Carrion N, Boada J, de la Torre-Ruiz MA (2015) Tor1, Sch9 and PKA downregulation in quiescence rely on Mtl1 to preserve mitochondrial integrity and cell survival. Mol Microbiol 97:93-109.	Saccharomyces cerevisiae
Lages 2015 PeerJ	2015	Lages YM, Nascimento JM, Lemos GA, Galina A, Castilho LR, Rehen SK (2015) Low oxygen alters mitochondrial function and response to oxidative stress in human neural progenitor cells. PeerJ 3:e1486.	Human	Stem cells	Oxidative stress;RONS Hypoxia
Rodrigues 2016 Biochem J	2015	Rodrigues MF, Obre E, Melo FH, Santos-Jr GC, Galina A, Jasiulionis MG, Rossignol R, Rumjanek FD, Amoedo ND (2016) Enhanced OXPHOS, glutaminolysis and beta-oxidation constitute the metastatic phenotype of melanoma cells. https://doi.org/10.1042/BJ20150645	Mouse	Endothelial;epithelial;mesothelial cell Other cell lines		Cancer
Lee 2015 Methods Mol Biol	2015	Lee W, Kelly RD, Yeung KY, Cagnone G, McKenzie M, John JC (2015) Analysis of mitochondrial DNA in induced pluripotent and embryonic stem cells. Methods Mol Biol 1330:219-52.	Mouse	Stem cells
Hals 2015 PLoS One	2015	Hals IK, Bruerberg SG, Ma Z, Scholz H, Björklund A, Grill V (2015) Mitochondrial respiration in insulin-producing β-cells: general characteristics and adaptive effects of hypoxia. PLoS One 10:e0138558.	Rat	Islet cell;pancreas;thymus Other cell lines	Oxidative stress;RONS
Renner 2015 Eur J Immunol	2015	Renner K, Geiselhöringer AL, Fante M, Bruss C, Färber S, Schönhammer G, Peter K, Singer K, Andreesen R, Hoffmann P, Oefner P, Herr W, Kreutz M (2015) Metabolic plasticity of human T cells: Preserved cytokine production under glucose deprivation or mitochondrial restriction, but 2-deoxy-glucose affects effector functions. Eur J Immunol 45:2504-16.	Human	Blood cells Lymphocyte
Boss 2015 US Patent	2015	Boss OD, Crisan M, Giacobino JP, (2015) Brown adipocyte progenitors in human sceletal muscle. US Patent US 2015/0240206 A1.	Human Mouse	Skeletal muscle Endothelial;epithelial;mesothelial cell Fat
Plecita-Hlavata 2015 J Bioenerg Biomembr	2015	Plecitá-Hlavatá L, Ježek J, Ježek P (2015) Aglycemia keeps mitochondrial oxidative phosphorylation under hypoxic conditions in HepG2 cells. J Bioenerg Biomembr 47(6):467-76.	Human	Liver	Oxidative stress;RONS	Cancer
Lisak 2015 Cell Death Differ	2015	Lisak D, Schacht T, Gawlitza A, Albrecht P, Aktas O, Koop B, Gliem M, Hofstetter HH, Zanger K, Bultynck G, Parys JB, De Smedt H, Kindler T, Adams-Quack P, Hahn M, Waisman A, Reed JC, Hövelmeyer N, Methner A (2015) BAX inhibitor-1 is a Ca²⁺ channel critically important for immune cell function and survival. Cell Death Differ 23:358-68.	Mouse	Blood cells Lymphocyte		Obesity
Victorino 2015 Tumour Biol	2015	Victorino VJ, Barroso WA, Assunção AK, Cury V, Jeremias IC, Petroni R, Chausse B, Ariga SK, Herrera AC, Panis C, Lima TM, Souza HP (2015) PGC-1β regulates HER2-overexpressing breast cancer cells proliferation by metabolic and redox pathways. Tumour Biol 37:6035-44.	Human	Genital Other cell lines		Cancer
Hort 2014 Biochimie	2014	Hort MA, Straliotto MR, de Oliveira J, Amoêdo ND, da Rocha JB, Galina A, Ribeiro-do-Valle RM, de Bem AF (2014) Diphenyl diselenide protects endothelial cells against oxidized low density lipoprotein-induced injury: Involvement of mitochondrial function. Biochimie 105:172-81.	Bovines	Other cell lines
Schoerner 2014 Thesis University Giessen	2014	Schörner S (2014) Changes in function of mitochondrial respiratory chain in pulmonary artery smooth muscle cells under conditions of chronic hypoxia : measurements by respirometry and remission-spectrophotometry. Thesis University Giessen 130 pp.	Rabbit	Endothelial;epithelial;mesothelial cell	Ischemia-reperfusion
Cheng 2014 Science	2014	Cheng SC, Quintin J, Cramer RA, Shepardson KM, Saeed S, Kumar V, Giamarellos-Bourboulis EJ, Martens JH, Rao NA, Aghajanirefah A, Manjeri GR6, Li Y, Ifrim DC, Arts RJ, van der Meer BM, Deen PM, Logie C, O'Neill LA, Willems P, van de Veerdonk FL, van der Meer JW, Ng A, Joosten LA, Wijmenga C, Stunnenberg HG, Xavier RJ, Netea MG (2014) mTOR- and HIF-1 α–mediated aerobic glycolysis as metabolic basis for trained immunity. Science 345:1250684.	Human	Blood cells Other cell lines
Karabatsiakis 2014 Transl Psychiatry	2014	Karabatsiakis A, Boeck C, Salinas-Manrique J, Kolassa S, Calzia E, Dietrich DE, Kolassa IT (2014) Mitochondrial respiration in peripheral blood mononuclear cells correlates with depressive subsymptoms and severity of major depression. Transl Psychiatry 4:e397.	Human	Blood cells	Cryopreservation	Neurodegenerative
Widmann 2014 Thesis	2014	Widmann M (2014) Effekte von Noradrenalin und LPS auf die mitochondriale Atmung von Alveolarmakrophagen. Thesis Universität Ulm, Medizinische Fakultät. 63 pp.	Mouse	Lung;gill Other cell lines		Sepsis
Brahma 2014 J Lipid Res	2014	Brahma MK, Adam RC, Pollak NM, Jaeger D, Zierler KA, Poecher N, Schreiber R, Romauch M, Moustafa T, Eder S, Ruelicke T, Preiss-Landl K, Lass A, Zechner R, Haemmerle G (2014) Fibroblast growth factor 21 is induced upon cardiac stress and alters cardiac lipid homeostasis. J Lipid Res 55:2229-41.	Mouse Rat	Heart
Piel 2014 Acta Physiol (Oxf)	2014	Piel S, Ehinger JK, Elmér E, Hansson Magnus J (2014) Metformin induces lactate production in peripheral blood mononuclear cells and platelets through specific mitochondrial Complex I inhibition. Acta Physiol (Oxf) 213:171-80.	Human	Blood cells Other cell lines Platelet		Diabetes
Rudnicki 2014 United States Patent Application Publication	2014	Rudnicki MA, Yin Hang (2014) MICRORNA INHIBITORS. United States Patent Application Publication 1-49.	Mouse	Skeletal muscle Fat		Obesity
Brandt 2014 Chem Biol Interact	2014	Brandt AP, do Rocio Andrade Pires A, Rocha ME, Noleto GR, Acco A, de Souza CE, Echevarria A, Dos Santos Canuto AV, Cadena SM (2014) Sydnone SYD-1 affects the metabolic functions of isolated rat hepatocytes. Chem Biol Interact 218C:107-14.	Rat	Liver	Cell death
Hecker 2014 JPEN	2014	Hecker M, Sommer N, Voigtmann H, Pak O, Mohr A, Wolf M, Vadász I, Herold S, Weissmann N, Morty R, Seeger W, Mayer K (2014) Impact of short- and medium-chain fatty acids on mitochondrial function in severe inflammation. J Parenter Enteral Nutr 38:587-94.	Human	Endothelial;epithelial;mesothelial cell Blood cells HUVEC
Doridot 2014 Antioxid Redox Signal	2014	Doridot LD Chatre LD, Ducat A, Vilotte JL, Lombes A, Méhats C, Barbaux S, Calicchio R, Ricchetti M, Vaiman D (2014) Nitroso-redox balance and mitochondrial homeostasis are regulated by STOX1, a pre-eclampsia associated gene. Antioxid Redox Signal 21:819-34.	Human	Endothelial;epithelial;mesothelial cell Other cell lines
De Oliveira 2014 Cell Tiss Res	2014	De Oliveira GP, Cortez E, Araujo GJ, de Carvalho Sabino KC, Neves FA, Bernardo AF, de Carvalho SN, Moura AS, Carvalho L, Thole AA (2014) Impaired mitochondrial function and reduced viability in bone marrow cells of obese mice. Cell Tiss Res 357:185-94.	Mouse	Stem cells
Van Bergen 2014 Mitochondrion	2014	Van Bergen NJ, Blake RE, Crowston JG, Trounce IA (2014) Oxidative phosphorylation measurement in cell lines and tissues. Mitochondrion 15:24-33.	Human Mouse	Nervous system Blood cells
Cotoia 2014 PLoS One	2014	Cotoia A, Scrima R, Gefter JV, Piccoli C, Cinnella G, Dambrosio M, Fink MP, Capitanio N (2014) p-Hydroxyphenylpyruvate, an intermediate of the Phe/ Tyr catabolism, improves mitochondrial oxidative metabolism under stressing conditions and prolongs survival in rats subjected to profound hemorrhagic shock. PLoS One 9:e90917.	Rat		Ischemia-reperfusion
Hereng 2014 Human Reprod	2014	Hereng TH, Elgstoen KBP, Eide L, Rosendal KR, Skalhegg BS (2014) Serum albumin and HCO3 2 regulate separate pools of ATP in human spermatozoa. Human Reprod 29:918-30.	Human	Genital
Larsen 2014 Am J Clin Nutr	2014	Larsen FJ, Schiffer TA, Ekblom B, Mattsson MP, Checa A, Wheelock CE, Nyström T, Lundberg JO, Weitzberg E (2014) Dietary nitrate reduces resting metabolic rate: a randomized, crossover study in humans. Am J Clin Nutr 99:843-50.	Human	Skeletal muscle Stem cells
Casanova 2014 Biochim Biophys Acta	2014	Casanova E, Baselga-Escudero L, Ribas-Latre A, Arola-Arnal A, Bladé C, Arola L, Salvadó MJ (2014) Epigallocatechin gallate counteracts oxidative stress in docosahexaenoxic acid-treated myocytes. Biochim Biophys Acta 1837:783-91.	Rat	Skeletal muscle Other cell lines	Cell death
Chakraborty 2014 J Cardiovasc Dis	2014	Chakraborty M, Phillips ARJ, Macdonald J, Windsor JA, Hickey AJR (2014) Mitochondrial respiration in mononuclear cells and heart fibers in spontaneously hypertensive rats. J Cardiovasc Dis ISSN:2330-459.	Rat	Heart Blood cells		Cardiovascular
Bayot 2014 Biochimie	2014	Bayot A, Gareil M, Chavatte L, Hamon MP, L'hermitte-Stead C, Beaumatin F, Priault M, Rustin P, Lombès A, Friguet B, Bulteau AL (2014) Effect of Lon protease knockdown on mitochondrial function in HeLa cells. Biochimie 100:38-47.	Human	Endothelial;epithelial;mesothelial cell HeLa
Corona 2014 Exp Neurol	2014	Corona JC, de Souza SC, Duchen MR (2014) PPARγ activation rescues mitochondrial function from inhibition of 2 complex I and loss of PINK1. Exp Neurol 253:16-27.	Human	Neuroblastoma		Parkinson's
Sonkar 2014 FASEB J	2014	Sonkar VK, Kulkarni PP, Dash D (2014) Amyloid beta peptide stimulates platelet activation through RhoA-dependent modulation of actomyosin organization. FASEB J 28:1819-29.	Human Mouse	Blood cells Platelet		Alzheimer's
Logan 2014 Nat Genet	2014	Logan CV, Szabadkai G, Sharpe JA, Parry DA, Torelli S, Childs AM, Kriek M, Phadke R, Johnson CA, Roberts NY, Bonthron DT, Pysden KA, Whyte T, Munteanu I, Foley AR, Wheway G, Szymanska K, Natarajan S, Abdelhamed ZA, Morgan JE, Roper H, Santen GW, Niks EH, van der Pol WL, Lindhout D, Raffaello A, De Stefani D, den Dunnen JT, Sun Y, Ginjaar I, Sewry CA, Hurles M, Rizzuto R. UK10K Consortium, Duchen MR, Muntoni F, Sheridan E (2014) Loss-of-function mutations in MICU1 cause a brain and muscle disorder linked to primary alterations in mitochondrial calcium signaling. Nat Genet 46:188-93.	Human	Fibroblast		Other
Fiuza 2014 Free Radic Res	2014	Fiuza B, Subelzú N, Calcerrada P, Straliotto MR, Piacenza L, Cassina A, Rocha JB, Radi R, de Bem AF, Peluffo G (2014) Impact of SIN-1-derived peroxynitrite flux on endothelial cell redox homeostasis and bioenergetics: protective role of diphenyl diselenide via induction of peroxiredoxins. Free Radic Res 49:122-32.	Bovines	Endothelial;epithelial;mesothelial cell	Oxidative stress;RONS
Felser 2014 Toxicology II	2014	Felser A, Lindinger PW, Schnell D, Kratschmar DV, Odermatt A, Mies S, Jenö P, Krähenbühl S (2014) Hepatocellular toxicity of benzbromarone: effects on mitochondrial function and structure. Toxicology 324:136-46.	Human	Liver Other cell lines	Cell death
Kramer 2014 J Vis Exp	2014	Kramer PA, Chacko BK, Ravi S, Johnson MS, Mitchell T, Darley-Usmar VM (2014) Bioenergetics and the oxidative burst: protocols for the isolation and evaluation of human leukocytes and platelets. J Vis Exp 2014 Mar 27(85). doi: 10.3791/51301.	Human	Blood cells Platelet
Gnaiger 2014 MitoPathways	2014	Gnaiger E (2014) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 4^th ed. Mitochondr Physiol Network 19.12. Oroboros MiPNet Publications, Innsbruck:80 pp. — see 5^th edition: Gnaiger 2020 BEC MitoPathways.	Human Mouse	Heart Skeletal muscle Fibroblast
Hirzel 2014 PhD Thesis	2014	Hirzel E (2014) Characterization of human bone marrow derived mesenchymal stem cells as a model for in vitro adipocytes studies. PhD Thesis 1-106.	Human	Fat Other cell lines		Obesity