Talk:MitoPedia: Oroboros QM

Work in progress

Keywords - definitions

• MitoFit data repository - MitoFit data bank

• Experiment

• Experimental assay
• Experimental assay series
• Dataset

• Sample

• Sample type
• Sample group
• Sample size

• MitoFit protocols

• Laboratory protocols
• Harmonization protocols (Begley, Ioannidis 2015)
• Solution protocols: media, substrates, uncouplers, inhibitors used in SUIT protocols, permeabilization agents, etc.
• Instrumental performance protocols
• Mitochondrial preparation protocols including biopsy sampling, tissue storage, cell preparation protocols, etc.
• Respirometric OXPHOS data acquisition and analysis protocols

• Normalization protocols

• MitoFit proficiency test

• Standardization
• Harmonization
• Standard operating procedures
• Subprotocols

• MitoFit team

• MitoFit moderator
• MitoFit accreditation panel

• MitoFit registered project

• MitoFit pre-registered project
• Prespecified protocols (Begley, Ioannidis 2015)
• Time-stamped protocols (Begley, Ioannidis 2015)
• Publicly deposited protocols (Begley, Ioannidis 2015)

Links to Publications

MiPMap

• Population

1. Property:Mammal and model
2. Property:Nonmammal
3. Property:Tissue and cell
4. Property:Cell line

• Sample type

= Population and Preparation

1. Property:Preparation
2. Property:Enzyme

• Pathophysiological arms of an Experiment

1. Property:Stress
2. Property:Diseases

• Respiratory control

1. Property:Respiration and regulation
2. Property:Coupling states
3. Property:Substrate states

• Instrumental platform

1. Property:Instrument and method

Links to MitoPedia

• MitoPedia