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{
    "query_string": "[[Category:Publications]] [[Instrument and method::Oxygraph-2k]] [[Preparation::Isolated mitochondria]]",
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	Was published in year	Reference	Organism	Tissue;cell
Hroudova 2020 Mol Neurobiol	2020	Hroudová J, Nováková T, Korábečný J, Maliňák D, Górecki L, Fišar Z (2020) Effects of novel tacrine derivatives on mitochondrial energy metabolism and monoamine oxidase activity-in vitro study. Mol Neurobiol 58:1102-13.	Pig	Nervous system
Hryc 2023 Nat Commun	2023	Hryc CF, Mallampalli VKPS, Bovshik EI, Azinas S, Fan G, Serysheva II, Sparagna GC, Baker ML, Mileykovskaya E, Dowhan W (2023) Structural insights into cardiolipin replacement by phosphatidylglycerol in a cardiolipin-lacking yeast respiratory supercomplex. https://doi.org/10.1038/s41467-023-38441-5	Saccharomyces cerevisiae
Hu 2017 Proc Natl Acad Sci U S A	2017	Hu H, Nan J, Sun Y, Zhu D, Xiao C, Wang Y, Zhu L, Wu Y, Zhao J, Wu R, Chen J, Yu H, Hu X, Zhu W, Wang J (2017) Electron leak from NDUFA13 within mitochondrial complex I attenuates ischemia-reperfusion injury via dimerized STAT3. Proc Natl Acad Sci U S A 114:11908-13.	Mouse
Huang 2017 Sci Rep	2017	Huang L, Zhang K, Guo Y, Huang F, Yang K, Chen L, Huang K, Zhang F, Long Q, Yang Q (2017) Honokiol protects against doxorubicin cardiotoxicity via improving mitochondrial function in mouse hearts. Sci Rep 7:11989.	Mouse	Heart
Huerta 2019 Aquat Toxicol	2019	Huerta B, Chung-Davidson YW, Bussy U, Zhang Y, Bazil JN, Li W (2019) Sea lamprey cardiac mitochondrial bioenergetics after exposure to TFM and its metabolites. Aquat Toxicol 219:105380.	Fishes	Heart
Iglesias-Gonzalez 2012 Neurochem Res	2012	Iglesias-Gonzalez J, Sanchez-Iglesias S, Mendez-Alvarez E, Rose S, Hikima A, Jenner P, Soto-Otero R (2012) Differential toxicity of 6-hydroxydopamine in SH-SY5Y human neuroblastoma cells and rat brain mitochondria: protective role of catalase and superoxide dismutase. Neurochem Res 37:2150-60.	Rat	Nervous system
Iglesias-Gonzalez 2013 J Neurosci Methods	2013	Iglesias-Gonzalez J, Sanchez-Iglesias S, Beiras-Iglesias A, Soto-Otero R, Mendez-Alvarez E (2013) A simple method for isolating rat brain mitochondria with high metabolic activity: Effects of EDTA and EGTA. J Neurosci Methods 213:39-42.	Rat	Nervous system
Iglesias-Gonzalez 2014 PhD Thesis	2014	Iglesias-Gonzalez J (2014) Neurotoxicity induced by oxidative stress and aluminium in relation to Parkinson’s disease: a mitochondrial bioenergetic approach by high-resolution respirometry. PhD Thesis 1-242.	Rat	Nervous system
Iglesias-Gonzalez 2016 Mol Neurobiol	2016	Iglesias-González J, Sánchez-Iglesias S, Beiras-Iglesias A, Méndez-Álvarez E, Soto-Otero R (2016) Effects of aluminium on rat brain mitochondria bioenergetics: an in vitro and in vivo study. Mol Neurobiol 54:563-70.	Rat	Nervous system
Imran 2015 J Neurochem	2015	Imran I, Hillert MH, Klein J (2015) Early metabolic responses to lithium/pilocarpine-induced status epilepticus in rat brain. J Neurochem 135:1007-18.	Rat	Nervous system
Inoue 2023 Sci Rep	2023	Inoue R, Miura M, Yanai S, Nishimune H (2023) Coenzyme Q₁₀ supplementation improves the motor function of middle-aged mice by restoring the neuronal activity of the motor cortex. https://doi.org/10.1038/s41598-023-31510-1		Nervous system
Irving 2015 J Clin Endocrinol Metab	2015	Irving BA, Lanza IR, Henderson GC, Rao RR, Spiegelman BM, Nair KS (2015) Combined training enhances skeletal muscle mitochondrial oxidative capacity independent of age. J Clin Endocrinol Metab 100:1654-63.	Human	Skeletal muscle
Isei 2019 Free Radic Biol Med	2019	Isei MO, Kamunde C (2019) Effects of copper and temperature on heart mitochondrial hydrogen peroxide production. Free Radic Biol Med 147:114-28.	Fishes	Heart
Isei 2021 Comp Biochem Physiol C Toxicol Pharmacol	2021	Isei MO, Chinnappareddy N, Stevens D, Kamunde C (2021) Anoxia-reoxygenation alters H₂O₂ efflux and sensitivity of redox centers to copper in heart mitochondria. Comp Biochem Physiol C Toxicol Pharmacol 248:109111.	Fishes	Heart
Isola 2018 MiPschool Tromso C3		AMPK deficiency elicits changes in OXPHOS in heart mitochondria.	Mouse	Heart
Isola 2022 Abstract Bioblast		P12. Isola Raffaella, Noli R, Isola M, Crisafulli A, Vargiu R, Loy F, Lai Y (2022) In rat brain and heart acute hypoxia induced mild changes in OXPHOS in both sexes. Bioblast 2022: BEC Inaugural Conference. In: https://doi.org/10.26124/bec:2022-0001	Rat	Heart Nervous system
Ivarsson 2016 Physiol Behav	2016	Ivarsson N, Schiffer TA, Hernández A, Lanner JT, Weitzberg E, Lundberg JO, Westerblad H (2016) Dietary nitrate markedly improves voluntary running in mice. Physiol Behav 168:55-61.	Mouse	Skeletal muscle
Jaburek 2013 Int J Biochem Cell Biol	2013	Jabůrek M, Ježek J, Zelenka J, Ježek P (2013) Antioxidant activity by a synergy of redox-sensitive mitochondrial phospholipase A2 and uncoupling protein-2 in lung and spleen. Int J Biochem Cell Biol 45:816-25.	Mouse
Jahandiez 2017 Basic Res Cardiol	2017	Jahandiez V, Cour M, Bochaton T, Abrial M, Loufouat J, Gharib A, Varennes A, Ovize M, Argaud L (2017) Fast therapeutic hypothermia prevents post-cardiac arrest syndrome through cyclophilin D-mediated mitochondrial permeability transition inhibition. Basic Res Cardiol 112:35.	Rabbit	Heart Nervous system
Jaiswal 2019 Mol Metab	2019	Jaiswal N, Gavin MG, Quinn WJ 3rd, Luongo TS, Gelfer RG, Baur JA, Titchenell PM (2019) The role of skeletal muscle Akt in the regulation of muscle mass and glucose homeostasis. Mol Metab 28:1-13.	Mouse	Skeletal muscle
Janssens 2015 Nutr Metab (Lond)	2015	Janssens S, Heemskerk MM, van den Berg SA, van Riel NA, Nicolay K, Willems van Dijk K, Prompers JJ (2015) Effects of low-stearate palm oil and high-stearate lard high-fat diets on rat liver lipid metabolism and glucose tolerance. Nutr Metab (Lond) 12:57.	Rat	Liver
Jardim-Messeder 2015 New Phytol	2015	Jardim-Messeder D, Caverzan A, Rauber R, de Souza Ferreira E, Margis-Pinheiro M, Galina A (2015) Succinate dehydrogenase (mitochondrial Complex II) is a source of reactive oxygen species in plants and regulates development and stress responses. New Phytol 208:776-89.	Plants
Jardim-Messeder 2016 Anticancer Res	2016	Jardim-Messeder D, Moreira-Pacheco F (2016) 3-Bromopyruvic acid inhibits tricarboxylic acid cycle and glutaminolysis in HepG2 cells. Anticancer Res 36:2233-41.	Mouse	Liver Kidney
Jasz 2021 J Cell Mol Med	2021	Jász DK, Szilágyi ÁL, Tuboly E, Baráth B, Márton AR, Varga P, Varga G, Érces D, Mohácsi Á, Szabó A, Bozó R, Gömöri K, Görbe A, Boros M, Hartmann P (2021) Reduction in hypoxia-reoxygenation-induced myocardial mitochondrial damage with exogenous methane. https://doi.org/10.1111/jcmm.16498	Rat	Heart
Jayakumari 2020 J Diabetes	2020	Jayakumari NR, Rajendran RS, Sivasailam A, Vimala SS, Nanda S, Manjunatha S, Pillai VV, Karunakaran J, Gopala S (2020) Impaired substrate-mediated cardiac mitochondrial complex I respiration with unaltered regulation of fatty acid metabolism and oxidative stress status in type 2 diabetic Asian Indians. J Diabetes 12:542-55.	Human	Heart
Jeger 2015 BioMed Res Internat	2015	Jeger V, Brandt S, Porta F, Jakob SM, Takala J, Djafarzadeh S (2015) Dose response of Endotoxin on hepatocyte and muscle mitochondrial respiration in vitro. BioMed Res Internat Article ID 353074:1-13.	Human	Skeletal muscle Liver Other cell lines
Jelenik 2013 Eur Heart J	2013	Jelenik T, Floegel U, Phielix E, Kaul K, Nowotny P, Partke HP, Schrader J, Roden M, Szendroedi S (2013) Non-alcoholic fatty liver disease and insulin resistance are associated with increased cardiac oxidative stress in mice. Eur Heart J 34:P5045.	Mouse	Heart
Jelenik 2014 Diabetes	2014	Jelenik T, Séquaris G, Kaul K, Ouwens DM, Phielix E, Kotzka J, Knebel B, Weiß J, Reinbeck AL, Janke L, Nowotny P, Partke HJ, Zhang D, Shulman GI, Szendroedi J, Roden M (2014) Tissue-specific differences in the development of insulin resistance in a mouse model for type 1 diabetes. Diabetes 63:3856-67.	Mouse	Skeletal muscle Liver
Jelenik 2018 Diabetes	2018	Jelenik T, Flögel U, Álvarez-Hernández E, Scheiber D, Zweck E, Ding Z, Rothe M, Mastrototaro L, Kohlhaas V, Kotzka J, Knebel B, Müller-Wieland D, Moellendorf S, Gödecke A, Kelm M, Westenfeld R, Roden M, Szendroedi J (2018) Insulin resistance and vulnerability to cardiac ischemia. Diabetes 67:2695-702.	Human Mouse	Heart
Jensen 2021 Free Radic Biol Med	2021	Jensen BS, Pardue S, Duffy B, Kevil CG, Staples JF, Fago A (2021) Suppression of mitochondrial respiration by hydrogen sulfide in hibernating 13-lined ground squirrels. Free Radic Biol Med 169:181-86.	Other mammals	Liver
Jesina 2004 Physiol Res	2004	Jesina P, Kholova D, Bolehovska R, Cervinkova Z, Drahota Z, Houstek J (2004) Glycerophosphate-dependent hydrogen peroxide production by rat liver mitochondria. Physiol Res 53:305-10.	Rat	Liver
Jezek 2010 Physiol Res	2010	Ježek J, Jabůrek M, Zelenka J, Ježek P (2010) Mitochondrial phospholipase A₂ activated by reactive oxygen species in heart mitochondria induces mild uncoupling. Physiol Res 59:737-47.	Rat	Heart
Jezek 2013 Abstract MiP2013		Ježek P, Ježek J, Zelenka J, Dlasková A, Jabůrek M (2013) Antioxidant synergy of mitochondrial uncoupling protein UCP2 and phospholipase iPLA2γ. Mitochondr Physiol Network 18.08.	Mouse	Lung;gill Islet cell;pancreas;thymus
Jezek 2014 Abstract MiP2014		Mitochondrial cristae morphology changes: from Hackenbrock to hypoxia.		Other cell lines
Jezek 2015 Antioxid Redox Signal	2015	Ježek J, Dlasková A, Zelenka J, Jabůrek M, Ježek P (2015) H2O2-activated mitochondrial phospholipase iPLA2γ prevents lipotoxic oxidative stress in synergy with UCP2, amplifies signaling via G-protein-coupled receptor GPR40, and regulates insulin secretion in pancreatic β-cells. Antioxid Redox Signal 23:958-72.		Islet cell;pancreas;thymus
Jiang 2019 EMBO Rep	2019	Jiang S, Koolmeister C, Misic J, Siira S, Kühl I, Silva Ramos E, Miranda M, Jiang M, Posse V, Lytovchenko O, Atanassov I, Schober FA, Wibom R, Hultenby K, Milenkovic D, Gustafsson CM, Filipovska A, Larsson NG (2019) TEFM regulates both transcription elongation and RNA processing in mitochondria. EMBO Rep 20:e48101.	Mouse	Heart
Jiang 2023 Sci Rep	2023	Jiang N, Wang Z, Guo X, Peng Z, He Y, Wang Q, Wu H, Cui Y (2023) Hepatic Runx1t1 improves body fat index after endurance exercise in obese mice. https://doi.org/10.1038/s41598-023-46302-w	Mouse	Liver
Jiang 2024 Nat Metab	2024	Jiang S, Yuan T, Rosenberger FA, Mourier A, Dragano NRV, Kremer LS, Rubalcava-Gracia D, Hansen FM, Borg M, Mennuni M, Filograna R, Alsina D, Misic J, Koolmeister C, Papadea P, de Angelis MH, Ren L, Andersson O, Unger A, Bergbrede T, Di Lucrezia R, Wibom R, Zierath JR, Krook A, Giavalisco P, Mann M, Larsson NG (2024) Inhibition of mammalian mtDNA transcription acts paradoxically to reverse diet-induced hepatosteatosis and obesity. Nat Metab [Epub ahead of print]. https://doi.org/10.1038/s42255-024-01038-3	Mouse	Liver
Jimenez-Aranda 2014 J Pineal Res	2014	Jimenéz-Aranda A, Fernández-Vázquez G, Serrano MM, Reiter RJ, Agil A (2014) Melatonin improves mitochondrial function in inguinal white adipose tissue of Zücker diabetic fatty rats. J Pineal Res 57:103-9.	Rat	Fat
Jimenez-Uribe 2021 Free Radic Biol Med	2021	Jimenez-Uribe AP, Bellido B, Aparicio-Trejo OE, Tapia E, Sanchez-Lozada LG, Hernandez-Santos JA, Fernandez-Valverde F, Hernandez-Cruz EY, Orozco-Ibarra M, Pedraza-Chaverri J (2021) Temporal characterization of mitochondrial impairment in the unilateral ureteral obstruction model in rats. Free Radic Biol Med 172:358-71.	Rat	Kidney
Joergensen 2015 J Cereb Blood Flow Metab	2015	Jørgensen T, Grunnet N, Quistorff B (2015) One-year high fat diet affects muscle-but not brain mitochondria. J Cereb Blood Flow Metab 35:943-50.	Rat	Skeletal muscle Nervous system
Joergensen 2017 Physiol Rep	2017	Jørgensen W, Rud KA, Mortensen OH, Frandsen L, Grunnet N, Quistorff B (2017) Your mitochondria are what you eat: a high-fat or a high-sucrose diet eliminates metabolic flexibility in isolated mitochondria from rat skeletal muscle. Physiol Rep 5. pii: e13207.	Rat	Skeletal muscle
Johansen 2011 Acta Physiol Scand	2011	Johansen D, Sanden E, Hagve M, Chu X, Sundset R, Ytrehus K (2011) Heptanol triggers cardioprotection via mitochondrial mechanisms and mitochondrial potassium channel opening in rat hearts. Acta Physiol Scand 201:435-44.	Rat	Heart
Johnson 2015 Aging Cell	2015	Johnson ML, Lalia AZ, Dasari S, Pallauf M, Fitch M, Hellerstein MK, Lanza IR (2015) Eicosapentaenoic acid but not docosahexaenoic acid restores skeletal muscle mitochondrial oxidative capacity in old mice. Aging Cell 14:734-43.	Mouse	Skeletal muscle
Johnson 2016 Diabetes	2016	Johnson ML, Distelmaier K, Lanza IR, Irving BA, Robinson MM, Konopka AR, Shulman GI, Nair KS (2016) Mechanism by which caloric restriction improves insulin sensitivity in sedentary obese adults. Diabetes 65:74-84.	Human	Skeletal muscle
Johnson 2016 Stem Cells Dev	2016	Johnson J, Lee W, Frazier AE, Vaghjiani V, Laskowski A, Rodriguez AL, Cagnone GL, McKenzie M, White SJ, Nisbet DR, Thorburn DR, St John JC (2016) Deletion of the complex I subunit NDUFS4 adversely modulates cellular differentiation. Stem Cells Dev 25:239-50.	Mouse	Stem cells
Johnson 2018 J Mol Cell Cardiol	2018	Johnson JM, Ferrara PJ, Verkerke ARP, Coleman CB, Wentzler EJ, Neufer PD, Kew KA, de Castro Brás LE, Funai K (2018) Targeted overexpression of catalase to mitochondria does not prevent cardioskeletal myopathy in Barth syndrome. J Mol Cell Cardiol 121:94-102.	Mouse	Heart Skeletal muscle
Johnson 2019 Mol Metab	2019	Johnson JM, Verkerke ARP, Maschek JA, Ferrara PJ, Lin CT, Kew KA, Neufer PD, Lodhi IJ, Cox JE, Funai K (2019) Alternative splicing of UCP1 by non-cell-autonomous action of PEMT. Mol Metab 31:55-66.	Mouse	Fat
Juellig 2008 Proteomics	2008	Jüllig M, Hickey AJ, Chai CC, Skea GL, Middleditch MJ, Costa S, Choong SY, Philips AR, Cooper GJ (2008) Is the failing heart out of fuel or a worn engine running rich? A study of mitochondria in old spontaneously hypertensive rats. Proteomics 8:2556-72.	Rat	Heart
Juhaszova 2021 Function (Oxf)	2021	Juhaszova M, Kobrinsky E, Zorov DB, Nuss HB, Yaniv Y, Fishbein KW, de Cabo R, Montoliu L, Gabelli SB, Aon MA, Cortassa S, Sollott SJ (2021) ATP synthase K⁺- and H⁺-fluxes drive ATP synthesis and enable mitochondrial K⁺-"uniporter" function: I. Characterization of ion fluxes. Function (Oxf) 3(2):zqab065. doi: 10.1093/function/zqab065