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{{#ask: [[Category:Publications]] [[Instrument and method::Oxygraph-2k]] [[Pathways::CIV]]
 |?Was published in year=Year
 |?Has title=Reference
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 |?Pathways=Pathway
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{
    "query_string": "[[Category:Publications]] [[Instrument and method::Oxygraph-2k]] [[Pathways::CIV]]",
    "query_source": "SMWSQLStore",
    "query_time": "0.0293",
    "from_cache": false
}

	Year	Reference	Coupling	Pathway	Preparation	Organism	Tissue;cell
Piel 2014 Acta Physiol (Oxf)	2014	Piel S, Ehinger JK, Elmér E, Hansson Magnus J (2014) Metformin induces lactate production in peripheral blood mononuclear cells and platelets through specific mitochondrial Complex I inhibition. Acta Physiol (Oxf) 213:171-80.	LEAK ROUTINE OXPHOS ET	N S CIV NS ROX	Permeabilized cells Intact cells	Human	Blood cells Other cell lines Platelet
Ping 2015 Oxid Med Cell Longev	2015	Ping Z, Zhang LF, Cui YJ, Chang YM, Jiang CW, Meng ZZ, Xu P, Liu HY, Wang DY, Cao XB (2015) The protective effects of Salidroside from exhaustive exercise-induced heart injury by enhancing the PGC-1𝛼–NRF1/NRF2 pathway and mitochondrial respiratory function in rats. Oxid Med Cell Longev Article ID 876825.	OXPHOS ET	N S CIV ROX	Permeabilized tissue	Rat	Heart
Plecita-Hlavata 2015 Am J Respir Cell Mol Biol	2015	Plecitá-Hlavatá L, Tauber J, Li M, Zhang H, Flockton AR, Pullamsetti SS, Chelladurai P, D'alessandro A, El Kasmi KC, Ježek P, Stenmark KR (2015) Constitutive reprogramming of fibroblast mitochondrial metabolism in pulmonary hypertension. Am J Respir Cell Mol Biol 55:47-57.	LEAK ROUTINE OXPHOS ET	N CIV Other combinations	Isolated mitochondria Intact cells	Human Bovines	Endothelial;epithelial;mesothelial cell Fibroblast
Pohland 2016 Neurochem Res	2016	Pohland M, Hagl S, Pellowska M, Wurglics M, Schubert-Zsilavecz M, Eckert GP (2016) MH84: a novel γ-secretase modulator/PPARγ agonist-improves mitochondrial dysfunction in a cellular model of Alzheimer's disease. Neurochem Res 41:231-42.	LEAK OXPHOS ET	N S CIV NS ROX	Permeabilized cells	Human	Kidney HEK
Porplycia 2017 Am J Physiol Regul Integr Comp Physiol	2017	Porplycia D, Lau GY, McDonald J, Chen Z, Richards JG, Moyes CD (2017) Subfunctionalization of COX4 paralogs in fish. Am J Physiol Regul Integr Comp Physiol 312:R671-R680.	LEAK	CIV ROX	Isolated mitochondria	Fishes	Skeletal muscle
Power 2016 Am J Physiol Heart Circ Physiol	2016	Power AS, Pham T, Loiselle DS, Crossman DH, Ward ML, Hickey AJ (2016) Impaired ADP channeling to mitochondria and elevated reactive oxygen species in hypertensive hearts. https://doi.org/10.1152/ajpheart.00050.2016	LEAK OXPHOS ET	N CIV NS	Permeabilized tissue Homogenate	Rat	Heart
Powers 2019 Neurourol Urodyn	2019	Powers SA, Ryan TE, Pak ES, Fraser MO, McClung JM, Hannan JL (2019) Chronic high-fat diet decreased detrusor mitochondrial respiration and increased nerve-mediated contractions. Neurourol Urodyn 38:1524-32.	LEAK OXPHOS	N S CIV NS	Homogenate	Mouse	Other cell lines
Price 2016 J Thermal Biol	2016	Price ER, Sirsat TS, Sirsat SKG, Kang G, Keereetaweep J, Aziz M, Chapman KD, Dzialowski EM (2016) Thermal acclimation in American alligators: Effects of temperature regime on growth rate, mitochondrial function, and membrane composition. J Thermal Biol p11.	LEAK OXPHOS ET	N S CIV NS ROX	Permeabilized tissue	Reptiles	Heart Skeletal muscle
Prouteau-Angebault 2013 Abstract IOC75		Prouteau-Angebault C (2013) Are cardiolipins involved in the mitochondrial respiratory chain defect in OPA1 mouse model? Mitochondr Physiol Network 18.03.	OXPHOS	N S CIV	Permeabilized cells Homogenate Isolated mitochondria	Mouse	Skeletal muscle Nervous system
Pruett 2022 Biol Sex Differ	2022	Pruett JE, Everman SJ, Hoang NH, Salau F, Taylor LC, Edwards KS, Hosler JP, Huffman AM, Romero DG, Yanes Cardozo LL (2022) Mitochondrial function and oxidative stress in white adipose tissue in a rat model of PCOS: effect of SGLT2 inhibition. https://doi.org/10.1186/s13293-022-00455-x		CIV	Homogenate	Rat	Fat
Qi 2017 Ann Allergy Asthma Immunol	2017	Qi S, Cindy Barnig C, Charles AL, Poirot A, Meyer A, Clere-Jehl R, de Blay F, Geny B (2017) Nasal allergen challenge in allergic rhinitis induces mitochondrial dysfunction of peripheral blood mononuclear cells. Ann Allergy Asthma Immunol 118:367-9.	OXPHOS LEAK	N S CIV	Permeabilized cells	Human	Blood cells Lymphocyte
Qu 2018 FASEB J	2018	Qu C, Zhang S, Wang W, Li M, Wang Y, van der Heijde-Mulder M, Shokrollahi E, Hakim MS, Raat NJH, Peppelenbosch MP, Pan Q (2018) Mitochondrial electron transport chain complex III sustains hepatitis E virus replication and represents an antiviral target. FASEB J 33:1008-19.	LEAK ROUTINE	CIV ROX	Intact cells	Human	Liver
Quemeneur 2022 Sci Rep	2022	Quéméneur JB, Danion M, Cabon J, Collet S, Zambonino-Infante JL, Salin K (2022) The relationships between growth rate and mitochondrial metabolism varies over time. https://doi.org/10.1038/s41598-022-20428-9	LEAK OXPHOS	N CIV NS ROX	Homogenate	Fishes	Skeletal muscle
Rackham 2016 Cell Rep	2016	Rackham O, Busch JD, Matic S, Siira SJ, Kuznetsova I, Atanassov I, Ermer JA, Shearwood AM, Richman TR, Stewart JB, Mourier A, Milenkovic D, Larsson NG, Filipovska A (2016) Hierarchical RNA processing is required for mitochondrial ribosome assembly. Cell Rep 16:1874-90.	LEAK OXPHOS ET	N S CIV NS Other combinations	Isolated mitochondria	Mouse	Heart
Radenkovic 2017 Biochem Pharmacol	2017	Radenkovic F, Holland OJ, Vanderlelie JJ, Perkins AV (2017) Selective inhibition of endogenous antioxidants with Auranofin causes mitochondrial oxidative stress which can be countered by selenium supplementation. Biochem Pharmacol 146:42-52.	ROUTINE OXPHOS ET	N S CIV NS ROX	Permeabilized cells	Human	Other cell lines
Rajasekaran 2018 FASEB J	2018	Rajasekaran R, Felser A, Nuoffer JM, Dufour JF, St-Pierre MV (2018) The histidine triad nucleotide-binding protein 2 (HINT-2) positively regulates hepatocellular energy metabolism. FASEB J 32:5143-61.	LEAK OXPHOS ET	N S CIV ROX	Isolated mitochondria	Mouse	Liver
Rajendran 2019 EMBO Mol Med	2019	Rajendran J, Purhonen J, Tegelberg S, Smolander OP, Mörgelin M, Rozman J, Gailus-Durner V, Fuchs H, Hrabe de Angelis M, Auvinen P, Mervaala E, Jacobs HT, Szibor M, Fellman V, Kallijärvi J (2019) Alternative oxidase-mediated respiration prevents lethal mitochondrial cardiomyopathy. EMBO Mol Med 11:e9456.	LEAK OXPHOS ET	N S CIV NS	Isolated mitochondria	Mouse	Liver Kidney Heart
Rajkumar 2018 Metabolism	2018	Rajkumar A, Liaghati A, Chan J, Lamothe G, Dent R, Doucet É, Rabasa-Lhoret R, Prud'homme D, Harper ME, Tesson F (2018) ACSL5 genotype influence on fatty acid metabolism: a cellular, tissue, and whole-body study. Metabolism 83:271-9.	OXPHOS ET	F N CIV NS	Permeabilized cells	Human Mouse	Skeletal muscle Other cell lines
Rampello 2018 Microb Cell	2018	Rampello NG, Stenger M, Westermann B, Osiewacz HD (2018) Impact of F₁F_o-ATP-synthase dimer assembly factors on mitochondrial function and organismic aging. Microb Cell 5:198–207.	OXPHOS	N CIV	Isolated mitochondria	Fungi
Rawat 2019 J Mol Biol	2019	Rawat S, Anusha V, Jha M, Sreedurgalakshmi K, Raychaudhuri S (2019) Aggregation of respiratory complex subunits marks the onset of proteotoxicity in proteasome inhibited cells. J Mol Biol 431:996-1015.	OXPHOS LEAK	N S CIV ROX	Permeabilized cells	Mouse	Nervous system Other cell lines
Reda 2019 Sci Rep	2019	Reda A, Refaat A, Abd-Rabou AA, Mahmoud AM, Adel M, Sabet S, Ali SS (2019) Role of mitochondria in rescuing glycolytically inhibited subpopulation of triple negative but not hormone-responsive breast cancer cells. Sci Rep 9:13748.	LEAK OXPHOS	N S CIV ROX	Permeabilized cells	Human	Endothelial;epithelial;mesothelial cell
Regueira 2009 Liver Int	2009	Regueira T, Lepper PM, Brandt S, Ochs M, Vuda M, Takala J, Jakob SM, Djafarzadeh S (2009) Hypoxia inducible factor-1alpha induction by tumour necrosis factor-alpha, but not by toll-like receptor agonists, modulates cellular respiration in cultured human hepatocytes. Liver Int 10:1582-92.	LEAK OXPHOS	N S CIV ROX	Permeabilized cells	Human	Liver
Reich 2016 Thesis	2016	Reich V (2016) Pathophysiologie und Verfahrensentwicklung: Mechanismen der Metabolisierung von Schwefelwasserstoff im mitochondrialen Atmungskreislauf von Lungenalveolarmakrophagen. Dissertation p91.	LEAK OXPHOS ET	N S CIV NS ROX	Intact cells Permeabilized cells	Mouse	Macrophage-derived
Repp 2019 Thesis	2019	Repp BM (2019) Identification and verification of novel disease-causing genes and therapy options for patients with mitochondrial disorders – Focus on ACAD9. PhD Thesis 178.	LEAK OXPHOS	N S CIV ROX	Permeabilized cells	Human	HEK
Reutzel 2018 Oxid Med Cell Longev	2018	Reutzel M, Grewal R, Silaidos C, Zotzel J, Marx S, Tretzel J, Eckert GP (2018) Effects of long-term treatment with a blend of highly purified olive secoiridoids on cognition and brain ATP levels in aged NMRI mice. Oxid Med Cell Longev 2018:4070935.	LEAK OXPHOS ET	N S CIV NS ROX	Isolated mitochondria	Mouse	Nervous system
Reutzel 2020 Oxid Med Cell Longev	2020	Reutzel M, Grewal R, Dilberger B, Silaidos C, Joppe A, Eckert GP (2020) Cerebral mitochondrial function and cognitive performance during aging: A longitudinal study in NMRI mice. Oxid Med Cell Longev 2020:4060769.	LEAK ET OXPHOS	N S CIV ROX	Isolated mitochondria	Mouse	Nervous system
Reyes-Fermin 2019 Antioxidants (Basel)	2019	Reyes-Fermín LM, Avila-Rojas SH, Aparicio-Trejo OE, Tapia E, Rivero I, Pedraza-Chaverri J (2019) The protective effect of alpha-mangostin against cisplatin-induced cell death in LLC-PK1 cells is associated to mitochondrial function preservation. Antioxidants (Basel) 8:E133.	LEAK ROUTINE ET	CIV ROX	Intact cells	Pig	Kidney
Rhein 2009 Proc Natl Acad Sci U S A	2009	Rhein V, Song X, Wiesner A, Ittner LM, Baysang G, Meier F, Ozmen L, Bluethmann H, Dröse S, Brandt U, Savaskan E, Czech C, Götz J, Eckert A (2009) Amyloid-beta and tau synergistically impair the oxidative phosphorylation system in triple transgenic Alzheimer's disease mice. Proc Natl Acad Sci U S A 106:20057-62.	LEAK OXPHOS ET	N CIV ROX	Isolated mitochondria	Mouse	Nervous system
Rhein 2010 PloS One	2010	Rhein V, Giese M, Baysang G, Meier F, Rao S, Schulz KL, Hamburger M, Eckert A (2010) Ginkgo biloba extract ameliorates oxidative phosphorylation performance and rescues abeta-induced failure. PloS One 5:e12359.	OXPHOS	CIV	Permeabilized cells Isolated mitochondria		Neuroblastoma
Richman 2015 PLoS Genet	2015	Richman TR, Ermer JA, Davies SM, Perks KL, Viola HM, Shearwood AM, Hool LC, Rackham O, Filipovska A (2015) Mutation in MRPS34 compromises protein synthesis and causes mitochondrial dysfunction. PLoS Genet 11:e1005089.	LEAK OXPHOS	N S CIV	Isolated mitochondria	Mouse	Heart Liver
Richman 2016 Nat Commun	2016	Richman TR, Spåhr H, Ermer JA, Davies SM, Viola HM, Bates KA, Papadimitriou J, Hool LC, Rodger J, Larsson NG, Rackham O, Filipovska A (2016) Loss of the RNA-binding protein TACO1 causes late-onset mitochondrial dysfunction in mice. Nat Commun 7:11884.	LEAK OXPHOS	N S CIV	Isolated mitochondria	Mouse	Heart Liver
Richter 2019 Life Sci Alliance	2019	Richter U, Ng KY, Suomi F, Marttinen P, Turunen T, Jackson C, Suomalainen A, Vihinen H, Jokitalo E, Nyman TA, Isokallio MA, Stewart JB, Mancini C, Brusco A, Seneca S, Lombès A, Taylor RW, Battersby BJ (2019) Mitochondrial stress response triggered by defects in protein synthesis quality control. Life Sci Alliance 2:e201800219.	OXPHOS ET	N CIV NS	Permeabilized cells	Human	Fibroblast
Robertson 2023 J Cell Sci	2023	Robertson GL, Riffle S, Patel M, Bodnya C, Marshall A, Beasley HK, Garza-Lopez E, Shao J, Vue Z, Hinton A, Stoll MS, de Wet S, Theart RP, Chakrabarty RP, Loos B, Chandel NS, Mears JA, Gama V (2023) DRP1 mutations associated with EMPF1 encephalopathy alter mitochondrial membrane potential and metabolic programs. https://doi.org/10.1242/jcs.260370	LEAK ROUTINE OXPHOS ET	F N S DQ CIV NS ROX	Permeabilized cells Intact cells	Human	Fibroblast
Rocha 2018 J Physiol Biochem	2018	Rocha C, Koury OH, Scheede-Bergdahl C, Bergdahl A (2018) Cardiac mitochondrial respiration following a low-carbohydrate, high-fat diet in apolipoprotein E-deficient mice. J Physiol Biochem 75:65-72.	LEAK OXPHOS ET	F N CIV NS ROX	Permeabilized tissue	Mouse	Heart
Rodinova 2019 Dis Model Mech	2019	Rodinova M, Krizova J, Stufkova H, Bohuslavova B, Askeland G, Dosoudilova Z, Juhas S, Juhasova J, Ellederova Z, Zeman J, Eide L, Motlik J, Hansikova H (2019) Deterioration of mitochondrial bioenergetics and ultrastructure impairment in skeletal muscle of a transgenic minipig model in the early stages of Huntington's disease. Dis Model Mech 12:dmm038737.	LEAK OXPHOS ET	N S CIV ROX	Isolated mitochondria	Pig	Skeletal muscle
Rodolphi 2017 Thesis	2017	Rodolphi MS (2017) Efeitos da nandrolona e da ceftriaxona na homeostasia glutamatérgica: uma busca por mecanismos interativos entre astrócitos e neurônios envolvidos no comportamento agressivo. Dissertation p58.	ROUTINE OXPHOS	S CIV ROX	Homogenate	Mouse	Nervous system
Rodrigues 2018 Free Radic Biol Med	2018	Rodrigues NR, Macedo GE, Martins IK, Gomes KK, de Carvalho NR, Posser T, Franco JL (2018) Short-term sleep deprivation with exposure to nocturnal light alters mitochondrial bioenergetics in Drosophila. Free Radic Biol Med 120:395-406.	LEAK ROUTINE OXPHOS ET	N S CIV NS ROX	Isolated mitochondria	Drosophila
Rodrigues 2018 Sci Rep	2018	Rodrigues APC, Camargo AF, Andjelkovic A, Jacobs HT, Oliveira MT (2018) Developmental arrest in Drosophila melanogaster caused by mitochondrial DNA replication defects cannot be rescued by the alternative oxidase. Sci Rep 8:10882.	OXPHOS	N CIV ROX	Homogenate Oxidase;biochemical oxidation	Drosophila
Rodrigues 2020 J Appl Physiol (1985)	2020	Rodrigues GC, Rocha NN, Maia LA, Melo I, Simões AC, Antunes MA, Bloise FF, Woyames J, da-Silva WS, Capelozzi VL, Abela G, Ball L, Pelosi P, Rocco PRM, Silva PL (2020) Impact of experimental obesity on diaphragm structure, function and bioenergetics. J Appl Physiol (1985) 129:1062-74.	LEAK OXPHOS ET	N CIV NS	Permeabilized tissue	Rat	Skeletal muscle
Rodriguez 2020 J Gerontol A Biol Sci Med Sci	2020	Rodríguez E, Hakkou M, Hagen TM, Lemieux H, Blier PU (2020) Divergences in the control of mitochondrial respiration are associated with lifespan variation in marine bivalves. J Gerontol A Biol Sci Med Sci 76:796-804.	LEAK OXPHOS ET	F N S Gp CIV ROX	Isolated mitochondria	Molluscs
Roempler 2016 J Biol Chem	2016	Römpler K, Müller T, Juris L, Wissel M, Vukotic M, Hofmann K, Deckers M (2016) Overlapping role of respiratory supercomplex factor Rcf2 and its N-terminal homolog Rcf3 in Saccharomyces cerevisiae. J Biol Chem 291:23769-78.	LEAK OXPHOS	N CIV NS ROX	Isolated mitochondria	Saccharomyces cerevisiae
Rohde 2017 Cell Death Differ	2017	Rohde K, Kleinesudeik L, Roesler S, Löwe O, Heidler J, Schröder K, Wittig I, Dröse S, Fulda S (2017) A Bak-dependent mitochondrial amplification step contributes to Smac mimetic/glucocorticoid-induced necroptosis. Cell Death Differ 24:83-97.	LEAK ROUTINE ET	CIV ROX	Intact cells	Mouse	Fibroblast
Rome 2022 Mol Metab	2022	Rome FI, Hughey CC (2022) Disrupted liver oxidative metabolism in glycine N-methyltransferase-deficient mice is mitigated by dietary methionine restriction. https://doi.org/10.1016/j.molmet.2022.101452	LEAK OXPHOS ET	N CIV ROX	Isolated mitochondria	Mouse	Liver
Rossato 2014 PLoS One	2014	Rossato FA, Zecchin KG, La Guardia PG, Ortega RM, Alberici LC, Costa RA, Catharino RR, Graner E, Castilho RF, Vercesi AE (2014) Fatty acid synthase inhibitors induce apoptosis in non-tumorigenic Melan-A cells associated with inhibition of mitochondrial respiration. PLoS One 9:e101060.	LEAK OXPHOS ET	N S CIV NS	Permeabilized cells Intact cells	Mouse	Endothelial;epithelial;mesothelial cell Other cell lines
Rovenko 2015 Comp Biochem Physiol A Mol Integr Physiol	2015	Rovenko BM, Kubrak OI, Gospodaryov DV, Yurkevych IS, Sanz A, Lushchak OV, Lushchak VI (2015) Restriction of glucose and fructose causes mild oxidative stress independently of mitochondrial activity and reactive oxygen species in Drosophila melanogaster. Comp Biochem Physiol A Mol Integr Physiol 187:27-39.	OXPHOS	N Gp CIV Other combinations ROX	Homogenate	Drosophila
Roy Chowdhury 2011 Mitochondrion	2011	Roy Chowdhury SK, Dobrowsky RT, Fernyhough P (2011) Nutrient excess and altered mitochondrial proteome and function contribute to neurodegeneration in diabetes. Mitochondrion 11:845-54.	OXPHOS	N CIV	Homogenate	Rat	Nervous system
Ruiz 2016 J Photochem Photobiol B	2016	Ruiz VE, Interdonato R, Cerioni L, Albornoz P, Ramallo J, Prado FE, Hilal M, Rapisarda VA (2016) Short-term UV-B exposure induces metabolic and anatomical changes in peel of harvested lemons contributing in fruit protection against green mold. J Photochem Photobiol B 159:59-65.		CIV ROX	Intact cells	Plants
Ryan 2016 Diabetes	2016	Ryan TE, Schmidt CA, Green TD, Spangenburg EE, Neufer PD, McClung JM (2016) Targeted expression of catalase to mitochondria protects against ischemic myopathy in high fat fed mice. Diabetes 65:2553-68.	LEAK OXPHOS ET	N S CIV Other combinations ROX	Isolated mitochondria	Mouse	Skeletal muscle
Ryan 2016 J Mol Cell Cardiol	2016	Ryan TE, Schmidt CA, Alleman RJ, Tsang AM, Green TD, Neufer PD, Brown DA, McClung JM (2016) Mitochondrial therapy improves limb perfusion and myopathy following hindlimb ischemia. J Mol Cell Cardiol 97:191-6.	LEAK OXPHOS ET	N S CIV NS ROX	Isolated mitochondria	Mouse	Skeletal muscle
Ryan 2018 JCI Insight	2018	Ryan TE, Yamaguchi DJ, Schmidt CA, Zeczycki TN, Shaikh SR, Brophy P, Green TD, Tarpey MD, Karnekar R, Goldberg EJ, Sparagna GC, Torres MJ, Annex BH, Neufer PD, Spangenburg EE, McClung JM (2018) Extensive skeletal muscle cell mitochondriopathy distinguishes critical limb ischemia patients from claudicants. JCI Insight 3:123235.	OXPHOS LEAK	N S CIV NS ROX	Permeabilized tissue	Human	Skeletal muscle