BEC 2020.1 doi10.26124bec2020-0001.v1

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Bioenergetics Communications is the Open Science journal on bioenergetics and mitochondrial physiology with Living Communications - ISSN 2791-4690

BEC 2020.1 doi10.26124bec2020-0001.v1

Has title::MitoEAGLE Task Group (2020) Mitochondrial physiology. Bioenerg Commun 2020.1. - Test version 0.12 - Last update: 2020-05-20

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Was written by::''Author affiliations in hyperlinks:'', Was written by::Gnaiger Erich, Was written by::Aasander Frostner Eleonor, Was written by::Abdul Karim Norwahidah, Was written by::Abdel-Rahman Engy Ali, Was written by::Abumrad Nada A, Was written by::Acuna-Castroviejo Dario, Was written by::Adiele Reginald C, Was written by::Ahn Bumsoo, Was written by::Alencar Mayke Bezerra, Was written by::Ali Sameh S, Was written by::Almeida Angeles, Was written by::Alton Lesley, Was written by::Alves Marco G, Was written by::Amati Francesca, Was written by::Amoedo Nivea Dias, Was written by::Amorim Ricardo, Was written by::Anderson Ethan J, Was written by::Andreadou Ioanna, Was written by::Antunes Diana, Was written by::Arago Marc, Was written by::Aral Cenk, Was written by::Arandarcikaite Odeta, Was written by::Arias-Reyes Christian, Was written by::Armand Anne-Sophie, Was written by::Arnould Thierry, Was written by::Avram Vlad F, Was written by::Axelrod Christopher L, Was written by::Bailey 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Abstract: [[has abstract::As the knowledge base and importance of mitochondrial physiology to evolution, health and disease expands, the necessity for harmonizing the terminology concerning mitochondrial respiratory states and rates has become increasingly apparent. The chemiosmotic theory establishes the mechanism of energy transformation and coupling in oxidative phosphorylation. The unifying concept of the protonmotive force provides the framework for developing a consistent theoretical foundation of mitochondrial physiology and bioenergetics. We follow the latest SI guidelines and those of the International Union of Pure and Applied Chemistry (IUPAC) on terminology in physical chemistry, extended by considerations of open systems and thermodynamics of irreversible processes. The concept-driven constructive terminology incorporates the meaning of each quantity and aligns concepts and symbols with the nomenclature of classical bioenergetics. We endeavour to provide a balanced view of mitochondrial respiratory control and a critical discussion on reporting data of mitochondrial respiration in terms of metabolic flows and fluxes. Uniform standards for evaluation of respiratory states and rates will ultimately contribute to reproducibility between laboratories and thus support the development of data repositories of mitochondrial respiratory function in species, tissues, and cells. Clarity of concept and consistency of nomenclature facilitate effective transdisciplinary communication, education, and ultimately further discovery.]]

• Bioblast editor: [[has editor::Gnaiger E]]

Keywords—MitoPedia

Respiratory states • SI - The International System of Units • IUPAC • Coupling control • Mitochondrial preparations • Protonmotive force • Uncoupling • Oxidative phosphorylation • Phosphorylation efficiency • Electron transfer-pathway • LEAK-respiration • Residual oxygen consumption • Normalization of rate • Flow • Flux • Flux control ratio • Mitochondrial marker • Cell count • Oxygen

Gnaiger 2019 MitoFit Preprint Arch

Authors: MitoEAGLE Task Group

• Corresponding author

Erich Gnaiger

Chair COST Action CA15203 MitoEAGLE

T +43 512 566796 15, F +43 512 566796 20

[email protected] | www.mitoeagle.org

• Coauthors (listed in alphabetical order); number of coauthors (2020-05-11): 664

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• Many coauthors have made significant additions and suggestions for improvement of the manuscript. All coauthors confirm to have read the final manuscript, and to agree to implement or discuss the recommendations in future manuscripts, presentations and teaching materials.

• Copyright: © 2020 The Authors

This publication is based on the Open Access preprint (Gnaiger et al 2019), distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are credited. © remains with the authors, who have granted MitoFit an Open Access preprint licence in perpetuity.

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Labels: MiParea: MiP area::Respiration, MiP area::mt-Awareness 

Preparation: Preparation::Permeabilized cells, Preparation::Permeabilized tissue, Preparation::Homogenate, Preparation::Isolated mitochondria  Enzyme: Enzyme::Marker enzyme  Regulation: Topic::Coupling efficiency;uncoupling, Topic::Flux control, Topic::mt-Membrane potential, Topic::Uncoupler  Coupling state: Coupling states::LEAK, Coupling states::OXPHOS, Coupling states::ET  Pathway: Pathways::F, Pathways::N, Pathways::S, Pathways::Gp, Pathways::DQ, Pathways::CIV, Pathways::NS, Pathways::Other combinations, Pathways::ROX 

additional label::MitoFitPublication, additional label::MitoEAGLEPublication, additional label::Respiratory states, additional label::SI - The International System of Units, additional label::IUPAC, additional label::Coupling control, additional label::Mitochondrial preparations, additional label::Protonmotive force, additional label::Uncoupling, additional label::Oxidative phosphorylation, additional label::Efficiency, additional label::Electron transfer-pathway, additional label::LEAK-respiration, additional label::Residual oxygen consumption, additional label::Normalization of rate, additional label::Flow, additional label::Flux, additional label::Flux control ratio, additional label::Mitochondrial marker, additional label::Count, additional label::Oxygen