Cookies help us deliver our services. By using our services, you agree to our use of cookies. More information

Difference between revisions of "O2k-OpenSupportAlert2020 Archive"

From Bioblast
Line 22: Line 22:
* '''Apr-27 Mo'''
* '''Apr-27 Mo'''
:{|
:{|
| width="100" align="center" | [[Image:O2k-Support.jpg|80px|link=http://wiki.oroboros.at/index.php/O2k-Open_Support |O2k-Open Support]][[File:Yellow-take care.png|25px|Take care]]
| width="110" align="center" | [[Image:O2k-Support.jpg|70px|link=http://wiki.oroboros.at/index.php/O2k-Open_Support |O2k-Open Support]][[File:Yellow-take care.png|25px|Take care]]
|'''Do you select the appropriate marks for the instrumental background correction when planning to apply them to a protocol with a high O<sub>2</sub> regime?'''
|'''Do you select the appropriate marks for the instrumental background correction when planning to apply them to a protocol with a high O<sub>2</sub> regime?'''
- To obtain an accurate O<sub>2</sub>  background correction, you must select the marks that correspond to your range of experimental O<sub>2</sub>  levels.
- To obtain an accurate O<sub>2</sub>  background correction, you must select the marks that correspond to your range of experimental O<sub>2</sub>  levels.
Line 30: Line 30:
* '''Apr-20 Mo'''
* '''Apr-20 Mo'''
:{|
:{|
| width="100" align="center" | [[Image:O2k-Support.jpg|80px|link=http://wiki.oroboros.at/index.php/O2k-Open_Support |O2k-Open Support]][[File:Blue-info.png|25px|Improve]]
| width="110" align="center" | [[Image:O2k-Support.jpg|70px|link=http://wiki.oroboros.at/index.php/O2k-Open_Support |O2k-Open Support]][[File:Blue-info.png|25px|Improve]]
|'''Did you know that some substrates alone cannot maintain a stable mitochondrial respiratory flux in OXPHOS?'''
|'''Did you know that some substrates alone cannot maintain a stable mitochondrial respiratory flux in OXPHOS?'''
- Unstable respiratory fluxes in OXPHOS might be due to substrates limitation.
- Unstable respiratory fluxes in OXPHOS might be due to substrates limitation.
Line 38: Line 38:
* '''Apr-14 Mo'''
* '''Apr-14 Mo'''
:{|
:{|
| width="100" align="center" | [[Image:O2k-Support.jpg|80px|link=http://wiki.oroboros.at/index.php/O2k-Open_Support |O2k-Open Support]][[File:Yellow-take care.png|25px|Take care]]
| width="110" align="center" | [[Image:O2k-Support.jpg|70px|link=http://wiki.oroboros.at/index.php/O2k-Open_Support |O2k-Open Support]][[File:Yellow-take care.png|25px|Take care]]
|'''Why are the oxygen levels different between chambers prior to my experimental run?'''
|'''Why are the oxygen levels different between chambers prior to my experimental run?'''
- After switching on the O2k, air calibration has to be performed; otherwise the displayed concentrations may deviate from accurate concentrations.
- After switching on the O2k, air calibration has to be performed; otherwise the displayed concentrations may deviate from accurate concentrations.
Line 46: Line 46:
* '''Apr-07 Mo'''
* '''Apr-07 Mo'''
:{|
:{|
| width="100" align="center" | [[Image:Logo OROBOROS-DatLab.jpg|60px|link=http://wiki.oroboros.at/index.php/DatLab |DatLab]][[File:Blue-info.png|25px|Improve]]
| width="110" align="center" | [[Image:Logo OROBOROS-DatLab.jpg|70px|link=http://wiki.oroboros.at/index.php/DatLab |DatLab]][[File:Blue-info.png|25px|Improve]]
|'''Did you know that you can edit the background parameters in the 'O<sub>2</sub> analysis template DL7.4?'''
|'''Did you know that you can edit the background parameters in the 'O<sub>2</sub> analysis template DL7.4?'''
- If you did not apply a finally evaluated O2 background correction to your experimental DatLab file, you can edit the O2 background parameters directly in the '''O2 analysis template DL7.4''' for completion of [[MiPNet24.06 Oxygen flux analysis - DatLab 7.4 |Oxygen flux analysis - DatLab 7.4]].
- If you did not apply a finally evaluated O2 background correction to your experimental DatLab file, you can edit the O2 background parameters directly in the '''O2 analysis template DL7.4''' for completion of [[MiPNet24.06 Oxygen flux analysis - DatLab 7.4 |Oxygen flux analysis - DatLab 7.4]].
Line 54: Line 54:
* '''Apr-02 Mo'''
* '''Apr-02 Mo'''
:{|
:{|
| width="100" align="center" | [[Image:SUIT icon.jpg|80px|link=https://wiki.oroboros.at/index.php/MitoPedia:_SUIT |MitoPedia: SUIT]][[File:Blue-info.png|25px|Improve]]
| width="110" align="center" | [[Image:SUIT icon.jpg|70px|link=https://wiki.oroboros.at/index.php/MitoPedia:_SUIT |MitoPedia: SUIT]][[File:Blue-info.png|25px|Improve]]
|'''Did you know that you can edit the background parameters in the 'O<sub>2</sub> analysis template DL7.4?'''
|'''Did you know that you can edit the background parameters in the 'O<sub>2</sub> analysis template DL7.4?'''
- '''Do you want to search the best [[SUIT]] protocol for your research questions?'''
- '''Do you want to search the best [[SUIT]] protocol for your research questions?'''

Revision as of 10:07, 4 May 2020

Currently Answered Questions from the »Oroboros Ecosystem Agenda«

May 2020

  • May-11 Th
O2k-Open SupportTake care Do you know how to avoid underestimating/overestimating your respiratory fluxes? Measuring steady states with high-resolution respirometry is the key to obtaining correct values.

- Learn more about steady states measured with high-resolution respirometry: performance and mark setting for data analysis. - »Steady state«


  • May-04 Mo
O2k-Open SupportTake care Do you load the correct instrumental background correction accordingly to your range of experimental O2 levels?

- See how to perform the instrumental background test. - » O2 background correction in DatLab« and » Instrumental oxygen background«

Apr 2020

  • Apr-27 Mo
O2k-Open SupportTake care Do you select the appropriate marks for the instrumental background correction when planning to apply them to a protocol with a high O2 regime?

- To obtain an accurate O2 background correction, you must select the marks that correspond to your range of experimental O2 levels. - » O2 Background correction - troubleshooting«


  • Apr-20 Mo
O2k-Open SupportImprove Did you know that some substrates alone cannot maintain a stable mitochondrial respiratory flux in OXPHOS?

- Unstable respiratory fluxes in OXPHOS might be due to substrates limitation. - » Pyruvate - troubleshooting«


  • Apr-14 Mo
O2k-Open SupportTake care Why are the oxygen levels different between chambers prior to my experimental run?

- After switching on the O2k, air calibration has to be performed; otherwise the displayed concentrations may deviate from accurate concentrations. - » Oxygen calibration - troubleshooting«


  • Apr-07 Mo
DatLabImprove Did you know that you can edit the background parameters in the 'O2 analysis template DL7.4?

- If you did not apply a finally evaluated O2 background correction to your experimental DatLab file, you can edit the O2 background parameters directly in the O2 analysis template DL7.4 for completion of Oxygen flux analysis - DatLab 7.4. - »SUIT: Browse DL-Protocols and templates«


  • Apr-02 Mo
MitoPedia: SUITImprove Did you know that you can edit the background parameters in the 'O2 analysis template DL7.4?

- Do you want to search the best SUIT protocol for your research questions? - Use the SUITbrowser: »SUITbrowser«

Mar 2020

  • Mar-16 Mo
MitoPedia: SUIT The standardized coupling control protocol to explore the bioenergetics of living cells

- DatLab 7.4 provides a step-by-step guide through the SUIT-003 protocol and its extensions. - »SUIT-003«



  • Mar-11 We
MitoPedia Does blebbistatin reduce oxygen dependence of respiration of permeabilized muscle fibers? This is one of the questions addressed in the COST Action CA15203 MitoEAGLE WG2.

- »Blebbistatin«



  • Mar-06 Fr
MitoPedia: SUIT Explore metabolic profiles and specific modulations of mitochondrial pathways in health and disease with SUIT reference protocols.

- »RP1« and »RP2«



  • Mar-03 Tu
MitoPedia Rapamycin - more differences or more in common with other mitObesity drugs?

- »Rapamycin«


Feb 2020

  • Feb-26 We
MitoPedia It is essential to titrate uncouplers in multiple steps for respirometric measurement of electron transfer capacity.

- »Noncoupled respiration«



  • Feb-24 Mo
MitoPedia More research is needed on the impact of viral infection on mitochondrial function.

- »Viruses and mitochondrial medicine«



  • Feb-19 We
MitoPedia Spermidine and other calorie restriction mimetics control autophagy and mitochondrial function.

- »Spermidine«



  • Feb-18 Tu
MitoPedia Why do we fight gas bubbles?

- Dive deep into »Oxygen solubility«



  • Feb-12 We
MitoPedia What do metformin, melatonin and other bioactive mitObesity compounds have in common?

- »MitObesity drugs«


Jan 2020

  • Jan-16 Th
MitoPedia Oxygen flux

- which SI units should be used?


MitoPedia Did you ever think that units for body mass could be an issue?

- »Body mass«



  • Jan-08 We
MitoPedia Force and Energy: this we all need in the New Year - and MitoPedia may help to clarify the difference.