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Talk:MitoEAGLE protocols, terminology, documentation

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Revision as of 12:46, 17 January 2018 by Beno Marija (talk | contribs)

Participants

CountryCityContact
ArmeniaYerevanTrchounian K
AustraliaVictoriaVan Bergen Nicole J
AustraliaMelbourneLionett S
AustraliaClayton VictoriaAlton Lesley
AustraliaMelbourneFerri Alessandra
AustraliaSydneyHoehn Kyle L
AustraliaMelbourneCassar Samantha
AustraliaMelbourneCoughlan Melinda T
AustraliaMelbourneGenders Amanda J
AustraliaQueenslandRadenkovic Filip
AustraliaSydneyKrycer James R
AustraliaMelbourneKuang Jujiao
AustraliaClaytonWolff Jonci Nikolai
AustraliaQueenslandHolland Olivia J
AustraliaQueenslandFisher Joshua J
AustraliaNedlandsPerks Kara L
AustraliaNedlandsFilipovska Aleksandra
AustraliaMelobourneBotella Javier
AustraliaSouthportVidimce Josif
AustraliaMelbourneWhitfield Jamie
AustraliaBurwoodTrewin Adam J
AustraliaParkvilleHardee Justin P
AustraliaMelbourne, VICMuccini Anna Maria
AustraliaMelbourneSaner Nicholas
AustraliaNewtown, SydneyStocker Roland
AustraliaGeelong, VictoriaMcKenzie Matthew
AustraliaSyndeyTon Riccardo
AustraliaMelbourneStepto Nigel K
AustraliaVictoriaWinwood-Smith Hugh
AustraliaMelbourneHewakapuge Sudinna
AustraliaQueenslandDong Lan-Feng
AustriaInnsbruckPassrugger Manuela
AustriaSalzburgKofler B
AustriaViennaKozlov Andrey V
AustriaInnsbruckKeller Markus A
AustriaInnsbruckBurtscher Martin
AustriaInnsbruckMeszaros Andras T
AustriaInnsbruckHoppel Florian
AustriaInnsbruckThapa Maheshwor
AustriaInnsbruckPlangger Mario
AustriaInnsbruckDoerrier Carolina
AustriaInnsbruckSchartner Melanie
AustriaInnsbruckDi Marcello Marco
AustriaInnsbruckGoebel G
AustriaInnsbruckSobotka Ondrej
AustriaInnsbruckBergmeister Lisa
AustriaInnsbruckAntunes Diana
AustriaKapferer Werner
AustriaInnsbruckGarcia-Souza Luiz F
AustriaInnsbruckKlocker Helmut
AustriaInnsbruckGallee Leon
AustriaInnsbruckCardoso Luiza HD
AustriaInnsbruckPerez Valencia Juan Alberto
AustriaInnsbruckKarabatsiakis Alexander
AustriaAldransHaider Markus
AustriaInnsbruckLaner Verena
AustriaInnsbruckSchwarzer Christoph
AustriaInnsbruckNindl Veronika
AustriaInnsbruckGnaiger Erich
AustriaKlosterneuburgSazanov Leonid A
AustriaInnsbruckSchmitt Sabine
AustriaInnsbruckCecatto Cristiane
BelgiumBrusselsSonveaux P
BelgiumLiegeVotion Dominique-Marie
BelgiumLeuven, FlandersBaekelandt V
BelgiumNamurArnould Thierry
BelguimSart Tilman (Liège)Kruse C
BrasilPorto AlegreHaas Clarissa
BrasiliaLimeiraRopelle Eduardo R
BrazilSao PauloSilber Ariel Mariano
BrazilJaboticabalOliveira Marcos Tulio
BrazilRio de JaneiroOliveira Marcus F
BrazilSão PauloCrispim Marcell
BrazilRio de JaneiroVieyra Adalberto
BrazilSao PauloVercesi Anibal E
BrazilRio de JaneiroGalina Antonio
BrazilSanta Maria - RSGoncalves Debora Farina
BrazilSanta Maria - Rio Grande do SulSoares Felix Alexandre Antunes
BrazilSão PauloKowaltowski Alicia J
CanadaVancouverBovard Josh
CanadaOttawaDarveau Charles-A
CanadaMontréalBreton Sophie
CanadaHamiltonScott Graham R
CanadaOttawaHarper Mary-Ellen
CanadaMontreal, QuebecBergdahl Andreas
CanadaMoncton, NBPichaud Nicolas
CanadaEdmontonHan Woo Hyun
CanadaVancouver, BCTausan Daniel
CanadaWinnipegChowdhury Subir Roy
CanadaQuebecJoseph Vincent
CanadaEdmonton (Alberta)Lemieux Helene
CanadaEdmontonZaugg Michael
CanadaSaint JohnPulinilkunnil Thomas
CanadaRimouskiMunro Daniel
CanadaCharlottetownAdiele Reginald C
CanadaEdmontonLucchinetti Eliana
CanadaRimouskiBlier Pierre U
CanadaHamiltonTarnopolsky Mark A
CanadaAntigonishWeir M
CanadaGuelphHolloway Graham P
ChileCoyhaiqueJana Prado Fabian
ChinaFuzhou, Fujian ProvinceChen Qi
ChinaXi`anLiu Jiankang
ChinaTianjinZhang Yong
ChinaPukou, Nanjing,Gan Zhenji
CroatiaZagrebCurik I
CroatiaZagrebRubelj Ivica
CroatiaSplitLjubkovic M
CroatiaZagrebSaric A
Czech RepublicPrague 10Urban Tomas
Czech RepublicPragueDrahota Zdenek
Czech RepublicPragueKrizova J
Czech RepublicPragueHoustek Josef
Czech RepublicHradec KraloveEndlicher Rene
Czech RepublicPlzen -Severni predmestiJedlicka Jan
Czech RepublicPardubiceMajtnerova Pavlina
Czech RepublicCeske BudejoviceZikova Alena
Czech RepublicHradec KraloveKucera Otto
Czech RepublicPardubiceHandl Jiri
Czech RepublicPraha 2Danhelovska Tereza
Czech RepublicVestecEzrova Zuzana
Czech RepublicPraha 2Zdrazilova Lucie
Czech RepublicVestecRohlena Jakub
Czech RepublicHradec KraloveStankova Pavla
Czech RepublicVestecDavidova Eliska
Czech RepublicHradec KraloveCervinkova Zuzana
Czech RepublicPardubiceRousar Tomas
Czech repHradec KraloveFalaye T
DenmarkCopenhagenGonzalez-Franquesa Alba
DenmarkCopenhagenKraunsoee R
DenmarkAarhus NJespersen Nichlas Riise
DenmarkRoskildeDalgaard Louise T
DenmarkCopenhagenDela Flemming
DenmarkHvidovreNehlin Jan O
DenmarkCopenhagen NMortensen OH
DenmarkCopenhagen NScheibye-Knudsen Morten
DenmarkCopenhagenNielsen B
DenmarkAarhus NBoetker Hans Erik
DenmarkCopenhagenLarsen Steen
DenmarkCopenhagenSoendergaard SD
DenmarkCopenhagen NMaise Chroeis K
EgyptCairoAbdel-Rahman Engy Ali
EgyptCairoAli Sameh S
EstoniaTallinnVendelin Marko
EstoniaTartuPaju Kalju
EstoniaTallinnPuurand Marju
EstoniaTallinnLaasmaa Martin
EstoniaTallinnKlepinin Aleksandr
EstoniaTallinnKarro N
EstoniaTallinnKaambre Tuuli
EstoniaTallinnTruu Laura
EstoniaTallinnShevchuk Igor
EstoniaTallinnTepp Kersti
EstoniaTallinnKlepinina Lyudmila
FinlandJyvaeskylaeKainulainen Heikki
FinlandHelsinkiSuomalainen Wartiovaara Anu
FinlandTurkuStier Antoine
FinlandHelsinkiJackson Christopher Benjamin
FranceLilleMontaigne David
FranceAngersSpinazzi Marco
FranceBordeaux cedexMourier A
FranceMartiniqueCano Sanchez Maria Consolacion
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FranceBordeauxAmoedo Nivea Dias
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FranceAngersProcaccio Vincent
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FranceParisBouillaud Frederic
FranceMaisons-Alfort CedexProla Alexandre
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FranceNouzillyCollin-Chenot Anne
GermanyRostockSokolova Inna
GermanyDuesseldorfHaendeler Judith
GermanyMainzMaull Felicia
GermanyFrankfurtOsiewacz Heinz D
GermanyNeuherbergEiner C
GermanyDüsseldorfGoy C
GermanyBiberach an der RißNold V
GermanyTuebingenKappler Lisa
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GermanyBremerhavenMark Felix Christopher
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GermanyDuesseldorfJelenik T
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GermanyMunichZischka Hans
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GermanyColognePesta Dominik
GermanyMagdeburgSchoenfeld Peter
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GermanyWickert Anika
GermanyWilhelmshavenSalmon Pablo
GermanyGießenSilaidos Carmina
GermanyCologneWiesner Rudolf J
GermanyDuesseldorfPiel Sarah
GermanyFrankfurt am MainViel Christian
GermanyCologneTrifunovic Aleksandra
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GermanyMarburgRamzan Rabia
GermanyDoermann Niklas
GermanyFreiburgSchuele R
GreeceHeraklionTavernarakis Nektarios
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Greece15771Andreadou Ioanna
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GreeceAthensTrougakos Ioannis P
HungaryBudapestKomlodi Timea
HungarySzegedBoros Mihaly
HungaryDebrecenVerebne Tar K
HungaryBudapestHorvath G
HungarySzegedFerdinandy Peter
HungaryBudapestChinopoulos Christos
HungaryBudapestTretter Laszlo
IndiaNew DelhiThakkar Himani
IndiaNew DelhiVincent Vinnyfred
IndiaLucknowGayen Jiaur
IndiaHyderabadJha Rajan Kumar
IndiaKollamSuravajhala Prashanth
IndiaHaryanaChakrabarti Sasanka
IndiaVaranasiSonkar Vijay K
IranTehranSafaei Zahra
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IrelandDublinO'Gorman Donal
IrelandDublinPorter Richard K
IsraelRishon Le ZionHachmo Yafit
IsraelZrifinSova Marina
IsraelBeer ShevaMishmar Dan
IsraelJerusalemSaada Reisch Ann
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ItalyMilanClementi Emilio
ItalyPadovaFernandez-Vizarra Erika
ItalyBolognaGasparre G
ItalyMonserratoIsola Raffaella
ItalyBolzano/BozenVolani Chiara
ItalyCataniaMagri Andrea
ItalyBariAttimonelli M
ItalyBolognaGenova Maria Luisa
ItalyCampobassoPallotta Maria Luigia
ItalyRomeScatena Roberto
ItalyAnconaBattino Maurizio
ItalyBolognaPaterlini S
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ItalySt. LorenzenHarrison David K
ItalyBolognaPorcelli AM
ItalyPadovaViscomi Carlo
ItalyUdineGrassi B
ItalyCataniaMessina Angela
ItalyPadovaBernardi Paolo
ItalyBolzanoZanon Alessandra
ItalyCataniaDe Pinto Vito
JapanItabashi-ku TokyoTanaka Masashi
JapanSapporoMatsumoto J
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KoreaSeoulPak Youngmi Kim
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Korea (South)SeoulLee Hong Kyu
LatviaRigaJansone Baiba
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LatviaRigaDambrova Maija
LatviaRigaVilks Karlis
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MalaysiaKuala LumpurHassan Hazirah
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MexicoTlalpanRodriguez-Enriquez Sara
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NetherlandsMaastrichtGrevendonk L
NetherlandsGA WageningenGrefte Sander
New ZealandWellingtonBerridge Michael V
New ZealandAucklandWard Marie Louise
New ZealandAucklandHickey Anthony J
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NorwayBergenBerge Rolf K
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NorwayBergenHaavik Jan
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PolandPoznanJarmuszkiewicz Wieslawa
PolandLodzWatala Cezary
PolandGdańskKaczor Jan Jacek
PolandWarsawDymkowska Dorota
PolandLodzLabieniec-Watala Magdalena
PolandWarsawSek Aleksandra
PolandWarsawKarkucinska-Wieckowska Agnieszka
PolandWarsawSzewczyk Adam
PolandWarsawWasilewski M
PolandWarsawBednarczyk Piotr
PolandWarsawWieckowski Mariusz R
PortugalPortoOliveira Jorge
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Republic of KoreaDaejeonPark SH
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Republic of KoreaBusanHan Jin
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RussiaYoshkar-OlaDubinin M
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SerbiaBelgradeDjordjevic M
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SerbiaBelgradeMisirkic Marjanovic Maja
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SwitzerlandLausanneMorato Fornaguera L
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SwitzerlandLausanneWeger M
TaiwanChanghua CityWei Yau-Huei
The NetherlandsGroningenBakker Barbara M
The NetherlandsDelftMcMillan Duncan GG
The NetherlandsMaastrichtSchrauwen Patrick
The NetherlandsMaastrichtNabben Miranda
The NetherlandsBT AmsterdamWuest Rob CI
UKLondonBettinazzi Stefano
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UKCambridgeBrown Guy C
UKCanterbury, KentGourlay Campbell W
UKLondonLane Nick
USAKansas CitySwerdlow Russell H
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USADentonDzialowski Edward M
USAOrlandoCoen Paul M
USABerkeleyWilliams Caroline M
USAOrlandoGoodpaster Bret H
USAFayettevilleIyer Shilpa
USAStanfordStary Creed
USADurhamLi Pingan Andy
USADenverVan Hove Johan
USALa JollaValentine Joseph Marco
USAAuroraSparagna Genevieve C
USABethesdaFessel Joshua Patrick
USAEl PasoBajpeyi Sudip
USABaton RougeIrving Brian A
USACorvallisRobinson Matthew M
USAFayettevilleRao RR
USAFairbanksCoker Robert H
USABaton RougeHand Steven C
USALouisvilleSkolik Robert A
USAGainesvilleNeyroud D
USALittle RockBorsheim Elisabet
USAPhiladelphiaFalk Marni J
USAFort CollinsLi Puma Lance C
USAMilwaukeeKandel Sunil Mani
USALittle RockMacMillan-Crow Lee Ann
USANashvilleWasserman David H
USAOrlandoPino Maria F
USAWakefieldVarricchio Frederick
USALa JollaSchilling Jan M
USAEast LansingBazil Jason N
USAAuroraMoreau Kerrie
USAGreenvilleNeufer P Darrell
USANew HavenCavalcanti-de-Albuquerque Joao Paulo
USAWinston-SalemTomar Dhanendra
USAChicagoDayanidhi Sudarshan
USAKansas CityThyfault John P
USALouisvilleMenze Michael A
USAWarminsterOrynbayeva Zulfiya
USACorvallisBatterson Philip M
USALittle RockParajuli Nirmala
USAWinston-SalemGonzalez-Armenta Jenny L
USAFairbanksO'Brien Kristin
USAIndianapolisBrozinick Joseph T
USACambridgeWohlwend Martin
USANeedhamBrown David A
USANew YorkGalkin Alexander
USAIowa CityChaurasia Bhagirath
USAAtlantaJang Young Charles
USAMiamiFontanesi F
USASan DiegoPatel Hemal H
USABostonKristal Bruce S
USABaltimoreGonzalez-Freire Marta
USAWinston-SalemAhn Bumsoo
USASt. LouisAbumrad Nada A
USAIowa CityWagner Brett A
USAFort CollinsChicco Adam J
USAEast LansingZhang Yizhu
USAStillwaterDavis Michael S
USADavisHellgren Kim T
USAPhiladelphiaGanetzky Rebecca
USAPittsburghJurczak Michael J
USATorranceRossiter Harry B
USABirminghamMoellering Douglas R
USAClevelandHoppel Charles L
USAAkronCohen Bruce H
USAJupiterTrivigno Catherine
USAOrlandoSparks Lauren M
USASan Diego; La JollaMolina Anthony JA
USALos AngelesKwast Kurt E
USARochesterNair K Sreekumaran
USAProvoHancock Chad R
USADavisAdams Sean H
USAGainesvilleLeeuwenburgh Christiaan
USAAuroraFord Ellen
USAAnn ArborTyrrell Daniel J
USACorvallisNewsom Sean A
USASt. LouisPietka Terri A
USAColumbusSims Carrie A
USAPittsburghProchownik Edward V
USAGalvestonDurham William J
USAPhiladelphiaJang David H
USAPhiladelphiaTowheed Atif
USASan DiegoCannon Daniel T
... further results


Comments and discussion

  1. We are mostly interested in two WG: (1) Since we are working mostly with heart and muscles, we are interested in WG 2 - MITOEAGLE data repository in muscle and other tissues. (2) WG 1 - Standard operating procedures and user requirement document: Protocols, terminology, documentation. Since we have an expertise in fatty acid metabolism, we are specially interested in experimental protocols for the evaluation of mitochondrial capacities regarding fatty acid metabolism. Of course our parts of the WG are also in our interest. - Marina Makrecka-Kuka, Edgars Liepinsh (2016).
  2. My role in Mito-EAGLE would be mainly in WG 2 and 4, with a focus on skeletal and cardiac muscle and cultured cardiomyocytes and endothelial cells. I would particularly like to bridge the gap between the group leaders and young investigators, trying to represent the young people who are the active users of the OROBOROS equipment. This will fit in nicely with the goals in WG1. ... Major congratulations on obtaining this beautiful collaborative grant! Very glad to see this network getting the recognition it deserves! Looking forward to being part of this! - Rob C Wuest (2016).
  3. Please, find enclosed my declaration to participate with my team in the following workgroups: WG1, WG2, WG3, WG4. We are now involved and have been in not a distant past – in studying of the following cell /tissue types:
    1. Blood cells, with particular emphasis on platelets and lymphocytes – isolated from animals and humans.
    2. Endothelial cells, fibroblasts, neurocytes (neuroblastoma), astrocytes, cancer cell lines – predominantly cultured.
    3. Hepatocytes, cardiomyocytes, cell isolated from brain – isolated from lab animals. - Cezary Watala (2016).
  4. I have already contacted the portuguese CNC to nominate me for the MC of theaction. Concerning my active participation, taking into account the type of work we do in my lab I could be included in all WGs. As you know we work with mitochondria from liver, muscle and fat, as well as cultured cells from different origins (WG2-4). The elaboration of SOPs (WG1) we can certainly contribute (see the book I edited on Mitochondrial Bioenergetics and in which you contribute a chapter). I believe that everybody can be part of the WG5, but as the coordinators of the action, you and Sandra should decide what is best for the success of the action. - Carlos Palmeira (2016).
  5. I would propose my participation in the WG1: Standard operating procedures and user requirement document: Protocols, terminology, documentation, considering that the goal of WG1 is to establish an integrated and analytic environment linking mitochondrial respiration with external data (cell physiology, anthropometry, spiroergometry, lifestyle, genomics) in the context of physical fitness evaluation and clinical diagnostics. I could give my active contribution in the phase of making platform that will aggregate the Action’s complete knowledge and provides the ability to make diagnostic profiling associated with diseases in particular tasks:
    1. Develop reccomendations for quality control, data reporting and data sharing beyond the published record. Develop concepts on Open Access and institutionalised service for data management, data mining and health-care conforming standards of data interpretation
    2. Provide a summary on strategic dissemination and an education programme for MITOEAGLE.
    3. Considering that we are in process of buying the oxygraph, thus broading capacities of my lab, I would be happy to open the door of my new lab for the innovative inter-laboratory ring test experiments and together with my team contribute in that phase of the MITOEAGLE Action. I look forward to the establishment of MitoGlobal EAGLE network where, as stated in the MoU, researchers will collaborate on mapping mitochondrial physiology and medicine. The creation of such a unique well-coordinated network of senior researchers and young investigators will definitely put an added value to existing data and publications, will increase quality and validity of the research, will bring new possibilities of data sharing and data mining and will hopefully bring us to the era of more economical research by saving resources through standardised and harmnonised protocols, where the measuremnts will not be wasted due to lack of comparability. - Nebojsa Lalic (2016).
  6. Our research interest is oriented to reproductive endocrinology; especially to mechanisms that govern steroidogenesis of testicular Leydig cells in disturbed homeostasis. We use several in vivo models:
    1. stress -/+ systemic or intratesticular blockade of different stress receptors (alpha1ADR; betaADR; GR)
    2. hypogonadal-hypogonadism -/+ testosterone-replacement therapy
    3. androgens anabolics treatment -/+ blockade od AR
    4. aged rats -/+ Viagra-treatment
    5. biological clock - Silvana Andric (2016).
  7. I took a look to the MoU and the different working groups. You know well my research focus and having this into account I am interested in actions related to Working group 1 (Respirometric reference protocols, Interlaboratory proficiency test, Instrumental platforms). Working group 2 and 3: I have generated multiple mitochondrial respiration data sets in different mouse tissues (mainly in skeletal muscle, hypothalamus, liver and white adipose tissue). Currently we are also performing these assays in white adipose tissue from human patients. Hence I am interested in all milestones of WG 2 and 3. WG 5 is related to WG 1 and as you know I have interest in training, dissemination and also together with my collaborators (if needed) we could help with data sets and a data interpretation. Overall, I have a general interest on this Action and my active role in MITOEAGLE could be discussed. I could be of help participating in some of the tasks where my expertise and interest fit best. We will be forming and interdisciplinary research group with four group leaders: JC Perales, R Guimera, M Sales-Pardo and PM Garcia-Roves with two different affiliations, University of Barcelona (JCP and PMG-R - Energy metabolism) and University Rovira I Virgili (RG and MS – Data base, statistics, data mining). - Pablo M Garcia-Roves (2016).
  8. I will be pleased to contribute to the tasks of WG1 by developing interlaboratory proficiency tests and instrumental platform comparison. Moreover, as a (potential) MC member of MitoEAGLE I can also offer visibility to the Action itself (i.e. WG5: MITOEAGLE dissemination and training, according to mitoglobal.org webpages) by establishing new interactions with the International Coenzyme Q10 Association (ICQA) where I act as a member of the Executive Committee. ICQA organizes biennal conferences on new highlights of Coenzyme Q research. In 2015, we held the conference in Bologna (http://conference2015.wix.com/icqaconference) and we included in the program also some scientific sessions dedicated to mitochondrial bioenergetics and diseases. I will be pleased to enforce cooperation between ICQA and MitoEAGLE. - Maria Luisa Genova (2016).
  9. We found the scientific content and objectives of the call very interesting and compatible with our wide expertise on oxysterol analysis in food and biological systems. Our group has a large experience on lipid composition and their degradation products (volatile and non-volatile), as well as on sensory analysis. Moreover, we are currently involved in the H2020-GERI-2014-1 project "PLOTINA" ("Promoting gender balance and inclusion in research, innovation and training") with Prof. Gallina Toschi (in cc) as coordinator; the project actually includes gendered case studies where gender and sex variables are considered. You can find further information about our expertises, publications and the PLOTINA project at the following webpages: https://www.unibo.it/sitoweb/maria.rodriguez/, https://www.unibo.it/sitoweb/tullia.gallinatoschi/, http://www.unibo.it/en/research/projects-and-initiatives/research-projects-horizon-2020-1/plotina - Maria Teresa Rodriguez Estrada (2016).
  10. As you know, our current/developing interests are with "evolution" (species comparisons) and "environment" (hypoxia and cold exposure), but have also experience and interest in assessing effects of "lifestyle" (diet, exercise) and "aging" as well (in rodents). - Adam J Chicco (2016).
  11. Congratulations on the considerable progress with MITOEAGLE! I am keen to participate in this exciting project and I’m sure I can make a valuable contribution to it's success. I have extensive experience performing respirometry assays in human muscle biopsies, myoblasts/tubes and mouse tissues in the contexts of aging, obesity, exercise and inactivity. I feel that I could contribute to any of the five working groups, but particularly to WG2, WG4, and WG5. I am also happy and willing to serve on the Management Committee if needed. Again, congratulations on organizing such an exciting project. - Paul M Coen (2016).
  12. I would be interested to be involved with WG1 and WG2. In particular, I am interested in contributing to developing protocols for multicenter quality control among labs, and for permeabilized muscle bundle respirometry. - Harry B Rossiter (2016).
  13. I think that we could contribute via participation in the evaluation of the protocols, and helping to develop them further. In addition, we have been working on the establishing a database that would allow us to keep protocol details, cell isolation and several other aspects. There is nothing very advanced, but we could contribute to establishing such data collection practice. In addition, we, as opposed to many others, happen to use Strathkelvin respirometer. This alternative hardware would allow us to verify whether the protocols work on them as well. - Marko Vendelin (2016).